Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N22
(314 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1068 - 24076662-24077231 30 0.44
04_03_1015 - 21734381-21736534 30 0.44
03_06_0496 + 34328702-34329674,34329726-34330631,34330858-343310... 30 0.44
09_04_0495 - 18068188-18068610 28 1.3
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 28 1.8
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 28 1.8
09_02_0150 - 5033342-5033806 27 3.1
04_04_0680 - 27217563-27220088 27 3.1
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 27 4.1
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 27 4.1
04_04_1091 - 30798420-30798584,30798870-30799045,30799127-307992... 27 4.1
08_02_0342 - 16007989-16008076,16008169-16008344 26 5.4
12_01_0855 + 8023266-8023459,8023830-8023866,8023911-8023966,802... 26 7.1
08_01_0558 - 4892520-4892696,4893086-4893271,4893497-4893692,489... 26 7.1
03_01_0601 + 4423831-4424115,4424278-4424406,4424615-4424779,442... 26 7.1
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 25 9.4
10_01_0130 + 1540412-1541173 25 9.4
09_02_0434 + 9365038-9366150,9367352-9368680,9368906-9370012,937... 25 9.4
07_03_1345 + 25919379-25920866,25921342-25921962,25922733-259228... 25 9.4
06_01_0824 - 6219477-6219556,6220427-6220808,6221415-6221448,622... 25 9.4
04_04_0986 - 29931302-29932834 25 9.4
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 25 9.4
03_05_0505 + 24991699-24991921,24992100-24992665 25 9.4
01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 25 9.4
>08_02_1068 - 24076662-24077231
Length = 189
Score = 29.9 bits (64), Expect = 0.44
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 194 HVRGESRDARVRMSALVRGSSDAHPVKSSARDSQRQLRFPIE*LSETELPRNPPPARS 21
H+RG +R ++ +RG +D S RD + +L ++ L LPR P P ++
Sbjct: 113 HLRGANRRLLDELNRALRGCADVRRENSRLRDEKAELAGKLQLL----LPRQPAPEKN 166
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.9 bits (64), Expect = 0.44
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 96 RISGAAFNGMCIRRTSHQSGHADSRVSTLAADVTAPGVAEQLVAGADLLFHLA 254
++ A + + TSH+S A R++T A TAP + A + LF+ A
Sbjct: 41 QVPSAVYASLLRLATSHRSLAAARRIATHLASSTAPSTSHSFTATSTFLFNRA 93
>03_06_0496 +
34328702-34329674,34329726-34330631,34330858-34331062,
34331152-34331348,34331434-34331492
Length = 779
Score = 29.9 bits (64), Expect = 0.44
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 235 SAPATSCSATPGAVTSAARVETRESACPLW*EVRLMHIPLKAAP 104
SAPA + SA+P A AA +E+ PL + L +PL+ P
Sbjct: 111 SAPAAAASASPPAPADAAEMESPIHMIPLNEVLDLGSVPLEETP 154
>09_04_0495 - 18068188-18068610
Length = 140
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = -1
Query: 194 HVRGESRDARVRMSALVRGSSDAHPVKSSARDSQRQLRFPIE*LSETELPRNPPPARSQ 18
H+R +R ++ +RG SD H + R + +L+ +E L + + N P+ SQ
Sbjct: 78 HLRDANRRLLDELNQAMRGCSDVHCENARLRKERAELQTKLEHLMQAQ-KNNTSPSSSQ 135
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 27.9 bits (59), Expect = 1.8
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = -1
Query: 227 GDQLLGDAGRGHVRGESRDARVRMSALVRGSSDAHPVKSSARDSQRQLRFPIE*LSETEL 48
G +LLGDA + RD + + L GSS + A S + P S L
Sbjct: 437 GIELLGDAVNQFILWHRRDIILSAAVLAAGSSTPSSAAAPAPPSPPEPPSPRHPPSPPPL 496
Query: 47 ---PR--NPPPARSQSP 12
PR PPP+ SQ P
Sbjct: 497 RSPPRQPTPPPSPSQQP 513
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 27.9 bits (59), Expect = 1.8
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = -1
Query: 227 GDQLLGDAGRGHVRGESRDARVRMSALVRGSSDAHPVKSSARDSQRQLRFPIE*LSETEL 48
G +LLGDA + RD + + L GSS + A S + P S L
Sbjct: 483 GIELLGDAVNQFILWHRRDIILSAAVLAAGSSTPSSAAAPAPPSPPEPPSPRHPPSPPPL 542
Query: 47 ---PR--NPPPARSQSP 12
PR PPP+ SQ P
Sbjct: 543 RSPPRQPTPPPSPSQQP 559
>09_02_0150 - 5033342-5033806
Length = 154
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 26 GRAEDSSEARSRLIILLENGVASANLGRC 112
GRA+ EA + L I++ENGV N+ RC
Sbjct: 43 GRADRMHEAENLLHIMIENGVRPNNV-RC 70
>04_04_0680 - 27217563-27220088
Length = 841
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = -1
Query: 302 RKPEIKVDLCVTAHNAG*VKQQIGAGDQLLGDAGRG----HVRGESRDARVRMSALVRGS 135
R P +K A G V G + LG +G G RG+ + R SA +GS
Sbjct: 32 RPPPVKPPAAAAAVAGGGVAGTPGGKGRGLGASGEGVGSSGGRGDPQSRRCTRSASAKGS 91
Query: 134 SDAHPVK 114
DA V+
Sbjct: 92 GDARSVE 98
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 7 HEGDCERAGGGFLGSSVSLNYSIGKRS 87
HEGD +G + SS+S++YS K S
Sbjct: 386 HEGDLSSSGNASVRSSMSVDYSGTKES 412
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 262 TTPAK*NSKSAPATSCSATP-GAVTSAARVETRESA 158
T+PA+ S SAP+TS +AT V RV ESA
Sbjct: 120 TSPARAPSTSAPSTSPTATTRSGVAWICRVRDAESA 155
>04_04_1091 -
30798420-30798584,30798870-30799045,30799127-30799216,
30799673-30799742,30800598-30800697,30800922-30801001,
30801347-30801412,30801489-30801597,30801862-30801905,
30802171-30802242,30803198-30803311,30804342-30804398
Length = 380
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 87 LPLRISGAAFNGMCIRRTSHQSGHADSRVSTLAAD 191
L R SGA F G C+ +SGHA++ + + A+
Sbjct: 286 LGARFSGAGFRGCCLAVV--ESGHAEAAAAFVRAE 318
>08_02_0342 - 16007989-16008076,16008169-16008344
Length = 87
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -1
Query: 254 G*VKQQIGAGDQLLGDAGRGHVRGESRDARVRMSAL 147
G V G GD G GRGH R + R + VRMS L
Sbjct: 34 GVVDADEGGGDDDGG--GRGHRRRQQRRSDVRMSTL 67
>12_01_0855 +
8023266-8023459,8023830-8023866,8023911-8023966,
8025102-8026215
Length = 466
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 183 AADVTAPGVAEQLVAGADLLFHLAGVVSGHAEIDFDLG 296
A D P +V+ D F A V+ G +E+D+DLG
Sbjct: 47 AVDKMPPNAVHPVVS-EDGRFGFALVIDGISEVDYDLG 83
>08_01_0558 -
4892520-4892696,4893086-4893271,4893497-4893692,
4893785-4893915
Length = 229
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 156 HADSRVSTLAADVTAPGVAEQLVAGADLLFHLAGVVS 266
+A R+ ADV G +AG D +FH+A V+
Sbjct: 65 NAGERLRLFKADVLDYGSVAAAIAGCDGVFHVASPVT 101
>03_01_0601 +
4423831-4424115,4424278-4424406,4424615-4424779,
4424925-4425230,4425387-4425448,4425776-4426145,
4426427-4426555,4427233-4427397,4427534-4427839,
4427928-4428068
Length = 685
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +3
Query: 132 RRTSHQSGHADSRVSTLAADVTAPGVAEQLVAGADLLFHLAGVV 263
RR+S SG S V DVT G G D +FH+A V
Sbjct: 385 RRSSDASGLPAS-VELAYGDVTDEGSLATAFDGCDAVFHVAAAV 427
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 25.4 bits (53), Expect = 9.4
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -1
Query: 227 GDQLLGDAGRGHVRGESRDARVRMSALVRGSSDAHPVKSSARDSQRQLRFPIE*LSETEL 48
G +LLGDA + RD + + L GSS P S A + +
Sbjct: 524 GIELLGDAVNQFILWHRRDIILSAAVLAAGSST--PSSSQAMTATAPAPPSPPEPPSPQH 581
Query: 47 PRNPPPARS 21
P +PPP RS
Sbjct: 582 PPSPPPLRS 590
>10_01_0130 + 1540412-1541173
Length = 253
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 59 ETELPRNPPPARSQSPS 9
E + P+ PPP R QSP+
Sbjct: 150 ERDAPKPPPPPRRQSPA 166
>09_02_0434 +
9365038-9366150,9367352-9368680,9368906-9370012,
9370960-9371022
Length = 1203
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 2 RNMKVTVNGRAEDSSEARSRLIILLENGVASANLGRCF*RDVHQTNLSPKRTCGLARL 175
RN+KV S+E R ++ I NG N + R V S + CG +L
Sbjct: 377 RNLKVATENMLARSNEVRQKIEIAERNGKTPTNGVISWLRRVDSITSSAEIICGQHQL 434
>07_03_1345 +
25919379-25920866,25921342-25921962,25922733-25922893,
25923284-25923422,25923509-25923592,25923944-25923982,
25924037-25924222,25924347-25924478,25924810-25925009,
25925294-25925498,25925618-25925944
Length = 1193
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 40 FLGSSVSLNYSIGKRSCLCESRALLLTGCASDEP 141
F G S L I SC+C++ L+LT C P
Sbjct: 387 FPGCSSLLQELIVALSCMCKAAPLVLTECPFSGP 420
>06_01_0824 -
6219477-6219556,6220427-6220808,6221415-6221448,
6222214-6222370,6224449-6224575,6224663-6224914
Length = 343
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 235 SAPATSCSATPGAVTSAAR 179
+AP++S S +PGA +AAR
Sbjct: 6 AAPSSSTSGSPGAAAAAAR 24
>04_04_0986 - 29931302-29932834
Length = 510
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 262 TTPAK*NSKSAPATSCSATPGA-VTSAARVETRESA 158
T+PA ++ SAPAT PGA T A ++ + A
Sbjct: 11 TSPASASASSAPATRKRKRPGATATDGAPAQSADDA 46
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 25.4 bits (53), Expect = 9.4
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -1
Query: 227 GDQLLGDAGRGHVRGESRDARVRMSALVRGSSDAHPVKSSARDSQRQL-RFPIE*LSETE 51
G QLLGDA + RD + + L GSS P S A + P E S
Sbjct: 437 GIQLLGDAVNQFILWHRRDIILSAAVLAVGSST--PSSSQAMTAAAPAPPSPPEPPSPRH 494
Query: 50 LPRNPPPARS 21
P +PPP RS
Sbjct: 495 -PPSPPPLRS 503
>03_05_0505 + 24991699-24991921,24992100-24992665
Length = 262
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 19 CERAGGGFLGSSVSL-NYSIGKRSCLCESRALL 114
C RAGGG GS SL + IG++ E+ A L
Sbjct: 230 CPRAGGGLDGSGASLRQWWIGRQLMANENPARL 262
>01_06_1208 +
35424241-35424370,35424415-35424728,35424782-35424967,
35425361-35425523,35425601-35425787,35425875-35426016
Length = 373
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 159 ADSRVSTLAADVTAPGVAEQLVAGADLLFHLAGVVSGHAEID 284
AD+R+ D+ P V GA +FHLA ++ H D
Sbjct: 79 ADTRLRLFQMDLLDPASITPAVDGAHGVFHLASPLTLHPTQD 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,522,412
Number of Sequences: 37544
Number of extensions: 137447
Number of successful extensions: 673
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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