Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N22
(314 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17970| Best HMM Match : DUF273 (HMM E-Value=7.5) 29 0.60
SB_49756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_49476| Best HMM Match : ABC_tran (HMM E-Value=0.00018) 28 1.8
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 27 2.4
SB_45491| Best HMM Match : Agenet (HMM E-Value=1.4) 27 3.2
SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 27 3.2
SB_51210| Best HMM Match : rve (HMM E-Value=2.2e-13) 27 3.2
SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17) 27 3.2
SB_11376| Best HMM Match : Agenet (HMM E-Value=0.69) 27 3.2
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 27 3.2
SB_49779| Best HMM Match : TPR_2 (HMM E-Value=0.24) 27 4.2
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 27 4.2
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_7319| Best HMM Match : SRCR (HMM E-Value=0) 26 5.6
SB_51365| Best HMM Match : ig (HMM E-Value=0.00037) 26 7.4
SB_4141| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4
SB_52900| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7) 25 9.8
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 25 9.8
>SB_17970| Best HMM Match : DUF273 (HMM E-Value=7.5)
Length = 271
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 75 WKTELPLRISGAAFNGMCIRRTSHQSGHADSRVSTLAA 188
WK E R++ + F+ +C+R+ H+S ADS ++ +A
Sbjct: 150 WKNERMFRLTASNFDRVCVRQKQHES-LADSLLNPSSA 186
>SB_49756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 28.7 bits (61), Expect = 1.0
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 75 WKTELPLRISGAAFNGMCIRRTSHQS 152
WK E R++ + F+ +C+R+ H+S
Sbjct: 149 WKNERMFRLTASNFDRVCVRQKQHES 174
>SB_49476| Best HMM Match : ABC_tran (HMM E-Value=0.00018)
Length = 127
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 43 LGSSVSLNYSIGKRSCLCESRALLLTG--CASDEPLTKADMRT 165
LG S S +S+G+R LC +RALL DE D RT
Sbjct: 72 LGESGS-GFSVGERQLLCLARALLQNSKLIVIDEATANVDYRT 113
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 179 SRDARVRMSALVRGSSDAHPVKSSARDS-QRQLRFPIE*LSETELPRNPPPAR 24
+ D V + A V +A P+ + D+ Q Q P LS E P PPP R
Sbjct: 1784 THDLLVTLMAEVAAIVNARPISALPMDADQPQTLSPAMLLSMKERPTGPPPGR 1836
>SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +1
Query: 25 RAGGGFLGSSVS---LNYSIGKRSCLCESRALLLTG--CASDEPLTKADMRT 165
R G G L + V N+S G+R +C +RA+L DE DM T
Sbjct: 506 RTGSGGLDAEVGERGRNFSAGQRQLVCLARAMLTRAKILCIDEATASVDMET 557
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 43 LGSSVSLNYSIGKRSCLCESRALLLTG--CASDEPLTKADMRT 165
LG S S +S+G+R LC +RALL DE D RT
Sbjct: 1124 LGESGS-GFSVGERQLLCLARALLQKSKLLVLDEATANVDYRT 1165
>SB_45491| Best HMM Match : Agenet (HMM E-Value=1.4)
Length = 228
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 179 SRDARVRMSALVRGSSDAHPVKSSARDS-QRQLRFPIE*LSETELPRNPPPAR 24
+ D V + A V +A P+ + D+ Q Q P LS E P PPP R
Sbjct: 58 THDLLVTLMAEVAAIVNARPISALPMDADQPQPLSPAMLLSMKERPTGPPPGR 110
>SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1584
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 179 SRDARVRMSALVRGSSDAHPVKSSARDS-QRQLRFPIE*LSETELPRNPPPAR 24
+ D V + A V +A P+ + D+ Q Q P LS E P PPP R
Sbjct: 1414 THDLLVTLMAEVAAIVNARPISAVPMDADQPQPLSPAMLLSMKERPTGPPPGR 1466
>SB_51210| Best HMM Match : rve (HMM E-Value=2.2e-13)
Length = 331
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 179 SRDARVRMSALVRGSSDAHPVKSSARDS-QRQLRFPIE*LSETELPRNPPPAR 24
+ D V + A V +A P+ + D+ Q Q P LS E P PPP R
Sbjct: 161 THDLLVTLMAEVAAIVNARPISAVPMDTDQPQPLSPAMLLSMKERPTGPPPGR 213
>SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 64 NYSIGKRSCLCESRALL--LTGCASDEPLTKADMRT 165
N+S+G+R LC +RALL DE D RT
Sbjct: 523 NFSVGQRQLLCLARALLQKCKILVLDEATANVDYRT 558
>SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17)
Length = 398
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 64 NYSIGKRSCLCESRALLLTG--CASDEPLTKADMRT 165
N+S+G+R +C +RALL DE D RT
Sbjct: 268 NFSVGQRQLICLARALLRRNVILIIDEATAHVDQRT 303
>SB_11376| Best HMM Match : Agenet (HMM E-Value=0.69)
Length = 228
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 179 SRDARVRMSALVRGSSDAHPVKSSARDS-QRQLRFPIE*LSETELPRNPPPAR 24
+ D V + A V +A P+ + D+ Q Q P LS E P PPP R
Sbjct: 58 THDLLVTLMAEVAAIVNARPISAVPMDADQPQPLSPAMLLSMKERPTGPPPGR 110
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 43 LGSSVSLNYSIGKRSCLCESRALLLTG--CASDEPLTKADMRT 165
LG S S +S+G+R LC +RALL DE D RT
Sbjct: 1154 LGESGS-GFSVGERQLLCLARALLQNTKLIVLDEATANVDYRT 1195
>SB_49779| Best HMM Match : TPR_2 (HMM E-Value=0.24)
Length = 563
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 40 FLGSSVSLNYSIGKRSCLCESRALLLTGCA 129
FL S NY + KRS C R++ +GCA
Sbjct: 391 FLPCSKRNNY-VSKRSATCSQRSISSSGCA 419
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 43 LGSSVSLNYSIGKRSCLCESRALL--LTGCASDEPLTKADMRT 165
LG S S +S+G+R LC +RALL DE D RT
Sbjct: 1197 LGESGS-TFSVGERQLLCLARALLQRCKVLVLDEATANVDYRT 1238
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 43 LGSSVSLNYSIGKRSCLCESRALL--LTGCASDEPLTKADMRT 165
LG S S +S+G+R LC +RALL DE D RT
Sbjct: 962 LGESGS-TFSVGERQLLCLARALLQRCKVLVLDEATANVDYRT 1003
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/58 (24%), Positives = 23/58 (39%)
Frame = -1
Query: 197 GHVRGESRDARVRMSALVRGSSDAHPVKSSARDSQRQLRFPIE*LSETELPRNPPPAR 24
G G + + + + G P K S R +QL ++ +LP PPP +
Sbjct: 592 GSEEGSPPERKRTLPRVPSGEKPFTPTKESTRIDTKQLGTTFVLVNRRDLPTGPPPPK 649
>SB_7319| Best HMM Match : SRCR (HMM E-Value=0)
Length = 957
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 244 NSKSAPATSCSATPGAVTSAARVETRESACPL 149
N+ +AP+++CS A SA + S C L
Sbjct: 561 NTTAAPSSNCSLATNATASANTTAAQNSDCSL 592
>SB_51365| Best HMM Match : ig (HMM E-Value=0.00037)
Length = 498
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 153 GHADSRVSTLAADVTAPGVAEQLVAGADLLFHLAGVVSGHAE 278
GH +++ TL + T+P V E L G L + + +G AE
Sbjct: 198 GHFNNKTGTLLLNGTSPQVLEWLQKGETLTCKVTKLDAGTAE 239
>SB_4141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 123 MCIRRTSHQSGHADSRVSTLAADVTA 200
+CIRR S+QSG A++ ++T+ TA
Sbjct: 30 LCIRRRSNQSGIAET-ITTVGTSETA 54
>SB_52900| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7)
Length = 154
Score = 25.4 bits (53), Expect = 9.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 307 NRANPRSKSISA*PLTTPAK*NSKSAPATSCSATPGAVTSAARVET 170
N AN S++++ T ++ N+K+ TSC G VTS RV T
Sbjct: 110 NDANEDSQTVNPFLYNTFSEANNKTL--TSCHLEVGLVTSIQRVST 153
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 64 NYSIGKRSCLCESRALLLTG--CASDEPLTKADMRT 165
N+S+G+R +C +RA+L DE D RT
Sbjct: 170 NFSVGQRQLVCLARAILRHSRILVIDEATANVDPRT 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,118,974
Number of Sequences: 59808
Number of extensions: 138681
Number of successful extensions: 466
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 400488992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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