Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N22
         (314 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   0.87 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   6.2  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              20   8.1  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 0.87
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 256 PAK*NSKSAPATSCSA-TPGAVTSAARVETRESACPL 149
           P K +  S+ +T+CS  T    T   R ++ ES CP+
Sbjct: 279 PVKQHRSSSASTTCSGHTVRCFTGGPR-KSHESQCPM 314


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 13  GDCERAGGGFLGSSVSLNYSIGK 81
           G  ERA   F G+S   N  +GK
Sbjct: 919 GLLERASPAFSGTSSPTNSLVGK 941


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 29  RAEDSSEARSRLIILLEN 82
           +  DSSEAR +LI   EN
Sbjct: 47  KLRDSSEARIKLINEEEN 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,939
Number of Sequences: 438
Number of extensions: 1154
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)