Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N22
(314 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g25460.1 68414.m03161 oxidoreductase family protein similar t... 29 0.65
At1g68540.1 68414.m07830 oxidoreductase family protein similar t... 29 0.87
At1g09510.1 68414.m01066 cinnamyl-alcohol dehydrogenase family /... 28 1.1
At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /... 27 2.0
At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /... 27 2.0
At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /... 27 2.0
At1g66800.1 68414.m07593 cinnamyl-alcohol dehydrogenase family /... 27 2.0
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 26 4.6
At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter... 26 4.6
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 26 4.6
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 26 4.6
At5g13830.1 68418.m01617 FtsJ-like methyltransferase family prot... 26 6.1
At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-l... 26 6.1
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 25 8.1
At3g56530.1 68416.m06286 no apical meristem (NAM) protein-relate... 25 8.1
At2g47030.1 68415.m05876 pectinesterase family protein contains ... 25 8.1
At1g09480.1 68414.m01060 cinnamyl-alcohol dehydrogenase family /... 25 8.1
>At1g25460.1 68414.m03161 oxidoreductase family protein similar to
dihydroflavonol 4-reductase GI:1332411 from [Rosa
hybrida], cinnamoyl CoA reductase from Pinus taeda
[gi:17978649], Eucalyptus gunnii [gi:2058311]
Length = 320
Score = 29.1 bits (62), Expect = 0.65
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 159 ADSRVSTLAADVTAPGVAEQLVAGADLLFHLAGVVS 266
A R+ AD+T G ++ V G D +FH+A VS
Sbjct: 50 AKERLKIFEADLTIEGSFDEAVNGVDGVFHIASRVS 85
>At1g68540.1 68414.m07830 oxidoreductase family protein similar to
cinnamoyl CoA reductase [Eucalyptus gunnii, gi:2058311],
cinnamyl-alcohol dehydrogenase, E. gunnii [gi:1143445],
CPRD14 protein, Vigna unguiculata [gi:1854445]
Length = 321
Score = 28.7 bits (61), Expect = 0.87
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 159 ADSRVSTLAADVTAPGVAEQLVAGADLLFHLAGVV 263
A R+ L AD+T G ++ V G D +FH A V
Sbjct: 50 AKQRLKILQADLTVEGSFDEAVNGVDGVFHTASPV 84
>At1g09510.1 68414.m01066 cinnamyl-alcohol dehydrogenase family /
CAD family similar to cinnamyl alcohol dehydrogenase,
Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna
unguiculata [gi:1854445]
Length = 322
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 159 ADSRVSTLAADVTAPGVAEQLVAGADLLFHLAGVVS 266
A ++ AD+ G EQ + G D +FH A VS
Sbjct: 54 AKEKLKLFKADLLEEGSFEQAIEGCDAVFHTASPVS 89
>At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 378
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 129 IRRTSHQSGHADSRVSTLAADVTAPGVAEQLVAGADLLFHLA-GVVSGHAEI 281
IR+ S + HA + + + +P ++ L GAD++ H A ++GH+++
Sbjct: 236 IRKISEMA-HAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDV 286
>At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 449
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 129 IRRTSHQSGHADSRVSTLAADVTAPGVAEQLVAGADLLFHLA-GVVSGHAEI 281
IR+ S + HA + + + +P ++ L GAD++ H A ++GH+++
Sbjct: 221 IRKISEMA-HAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDV 271
>At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 464
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 129 IRRTSHQSGHADSRVSTLAADVTAPGVAEQLVAGADLLFHLA-GVVSGHAEI 281
IR+ S + HA + + + +P ++ L GAD++ H A ++GH+++
Sbjct: 236 IRKISEMA-HAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDV 286
>At1g66800.1 68414.m07593 cinnamyl-alcohol dehydrogenase family /
CAD family similar to cinnamyl alcohol dehydrogenase
[Eucalyptus gunnii] GI:1143445, CPRD14 protein, Vigna
unguiculata [gi:1854445]
Length = 319
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 117 NGMCIRRTSH--QSGHADSRVSTLAADVTAPGVAEQLVAGADLLFHLAGVVS 266
N M ++T+H A R+ +D+ G +Q + G D +FH A VS
Sbjct: 38 NPMDTKKTNHLLTLEGASERLKLFKSDLLEEGSFDQAIEGCDGVFHTASPVS 89
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = -2
Query: 292 RSKSISA*PLTTPAK*NSKSAPATSCSATPGAVTSAARVETRESACPL 149
+S + + P T+P K + ++P T+ + TP A ++++ VE+ +S P+
Sbjct: 30 KSPTTPSAPTTSPTKSPAVTSPTTAPAKTPTA-SASSPVESPKSPAPV 76
>At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter
(MRP2) almost identical to MgATP-energized glutathione
S-conjugate pump GI:2909781 from [Arabidopsis thaliana]
Length = 1623
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 49 SSVSLNYSIGKRSCLCESRALLLTG--CASDEPLTKADMRT 165
S N+S+G+R L SRALL DE D+RT
Sbjct: 1373 SEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRT 1413
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 26.2 bits (55), Expect = 4.6
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -1
Query: 206 AGRGHVRGESRDARVRMSALVRGSSDAHPVKSSARDSQRQLRFPIE*LSETELPRNPPPA 27
+G R SR +R R +L SS + V S +R R+ + P P PP
Sbjct: 26 SGSSPSRSISR-SRSRSRSLSSSSSPSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSK 84
Query: 26 RSQSPS 9
+ SPS
Sbjct: 85 GASSPS 90
Score = 25.8 bits (54), Expect = 6.1
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 188 RGESRDARVRMSALVRGSSDAHP----VKSSARDSQRQLR-FPIE*LSETELPR-NPPPA 27
RG++ R R ++ RG S + P +S R S R++R P+ S L R +PPP
Sbjct: 254 RGDTPPRR-RPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPR 312
Query: 26 RSQSP 12
R +SP
Sbjct: 313 RLRSP 317
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 26.2 bits (55), Expect = 4.6
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -1
Query: 206 AGRGHVRGESRDARVRMSALVRGSSDAHPVKSSARDSQRQLRFPIE*LSETELPRNPPPA 27
+G R SR +R R +L SS + V S +R R+ + P P PP
Sbjct: 26 SGSSPSRSISR-SRSRSRSLSSSSSPSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSK 84
Query: 26 RSQSPS 9
+ SPS
Sbjct: 85 GASSPS 90
Score = 25.8 bits (54), Expect = 6.1
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 188 RGESRDARVRMSALVRGSSDAHP----VKSSARDSQRQLR-FPIE*LSETELPR-NPPPA 27
RG++ R R ++ RG S + P +S R S R++R P+ S L R +PPP
Sbjct: 261 RGDTPPRR-RPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPR 319
Query: 26 RSQSP 12
R +SP
Sbjct: 320 RLRSP 324
>At5g13830.1 68418.m01617 FtsJ-like methyltransferase family protein
contains Pfam profile: PF01728 FtsJ-like
methyltransferase
Length = 224
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +3
Query: 90 PLRISGAAFNGMCIRRTSHQSGHADSRVSTLAADV 194
PLR SG GM I++ DSRV T+AADV
Sbjct: 63 PLR-SGGIVVGMDIKKVKVPP-QCDSRVQTIAADV 95
>At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-like
SR protein (SRZ22) identical to RSZp22 protein
[Arabidopsis thaliana] gi|2582645|emb|CAA05352, 9G8-like
SR protein [Arabidopsis thaliana] GI:3435094; contains
Pfam profiles PF00076: RNA recognition motif. (a.k.a.
RRM, RBD, or RNP domain) and PF00098: Zinc knuckle;
identical to cDNA 9G8-like SR protein (SRZ22) GI:3435093
Length = 200
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 143 RGSSDAHPVKSSARDSQRQLRFP-IE*LSETELPRNPPPARSQSPS 9
RG + KS +R R R P S + R+PPP R +SPS
Sbjct: 117 RGGTGRRRSKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPS 162
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 116 KSSARDSQRQLRFPIE*LSETELPRNPPPARSQSPS 9
+S R +R R P+ + PR+PPP R +S S
Sbjct: 633 RSPVRGRRRISRSPVPARRRSVRPRSPPPDRRRSLS 668
>At3g56530.1 68416.m06286 no apical meristem (NAM) protein-related
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to NAC domain protein NAC2
(GI:21554255) {Arabidopsis thaliana}
Length = 319
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 28 AGGGFLGSSVSLNYSIGKRS 87
AG G +G SL Y +GK+S
Sbjct: 147 AGNGIVGYKTSLEYYVGKQS 166
>At2g47030.1 68415.m05876 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 588
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 233 GAGDQLLGDAGRGHVRGESRDARVRMSALV 144
GA +L+ AGRG G ARVR + +V
Sbjct: 250 GADRKLMAKAGRGRRGGRGGGARVRTNFVV 279
>At1g09480.1 68414.m01060 cinnamyl-alcohol dehydrogenase family /
CAD family similar to cinnamyl alcohol dehydrogenase,
Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna
unguiculata [gi:1854445]
Length = 369
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 159 ADSRVSTLAADVTAPGVAEQLVAGADLLFHLAGVV 263
A R+ AD+ EQ + G D +FH A V
Sbjct: 101 AKERLKLFKADLLEESSFEQAIEGCDAVFHTASPV 135
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,609,035
Number of Sequences: 28952
Number of extensions: 93880
Number of successful extensions: 357
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 330493944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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