Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N20
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.9  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 576 AISVTGADLIAGNISHEPW 520
           A+++TG  +I GNI+ E W
Sbjct: 140 AMTITGPLVIIGNIAMELW 158



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 449 FSSSPVSPHPPTFPKLPSFNCFS 381
           ++S   +P+P T  KL +FN F+
Sbjct: 339 YASLDETPNPVTNGKLYNFNTFA 361


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 392 NCFSSKRWSKLRQTG 348
           +C S + WSKL +TG
Sbjct: 111 SCISEEVWSKLIETG 125


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 304  IVILTNSFTFNDHVKPVCLSFDHRLDEKQLKEGNFGKV 417
            I+I+ +S T+      VC +    ++EK L+    GK+
Sbjct: 1359 IIIVMSSVTYGIDTVAVCDACYSTIEEKNLQVNESGKL 1396


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 626 VSGNTRPPPLSPLHTA 579
           V+GN  PPP++   T+
Sbjct: 148 VTGNDAPPPITSFETS 163


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 467 LSTCDAFSSSPVSPHPP 417
           +++ D+F +S V P PP
Sbjct: 27  VNSADSFKASKVGPAPP 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,280
Number of Sequences: 336
Number of extensions: 3248
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)