Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N20
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    60   2e-11
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    28   0.087
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    28   0.087
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    28   0.087
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    25   0.46 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 60.1 bits (139), Expect = 2e-11
 Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
 Frame = +1

Query: 13  LQELPWHAGVYRKTTTPYMQICGGXXXXXXXXXXAAHCFWNDIEKLLPASRFAVAVGKLY 192
           + E P  AG+ ++T  P M ICG           AAHC  ++       ++ A+ VG+  
Sbjct: 169 INEFPMMAGI-KRTYEPGM-ICGATIISKRYVLTAAHCIIDE-----NTTKLAIVVGE-- 219

Query: 193 RPWNNQHDAYAQK-SDVDEIKVPERYQG-SATNFQ-DDIAIVILTNSFTFNDHVKPVCLS 363
             W+++ +  A     ++++ +  +Y      ++Q +DIA++       F D V P CL 
Sbjct: 220 HDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLP 279

Query: 364 FDHRLDEKQLKEGNFGKVGGWGLTGEDEKASQVLKTVDLPYVDIQQCITGSPPGFMAYIT 543
           F H LD      G+   V GWG T  +   S +L+   L  +   +C       +   I 
Sbjct: 280 FQHFLDS---FAGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECYK-----YYGNIM 331

Query: 544 SDKICAGYTNGTAVCKGDSGGGLVF 618
            + +CA Y  G   C+ DSGG +++
Sbjct: 332 VNAMCA-YAKGKDACQMDSGGPVLW 355


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 0.087
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 334 NDHVKPVCLSFDHRLDEKQLKEGNFGKVGGWGLTGEDEKASQVLK-TVDLPYVDIQQCI 507
           ND ++P    F   LD K ++EGN  +        +D  +  V+K TV   Y+ +Q  +
Sbjct: 278 NDILRPYVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLL 336


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 0.087
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 334 NDHVKPVCLSFDHRLDEKQLKEGNFGKVGGWGLTGEDEKASQVLK-TVDLPYVDIQQCI 507
           ND ++P    F   LD K ++EGN  +        +D  +  V+K TV   Y+ +Q  +
Sbjct: 193 NDILRPYVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLL 251


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 27.9 bits (59), Expect = 0.087
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 334 NDHVKPVCLSFDHRLDEKQLKEGNFGKVGGWGLTGEDEKASQVLK-TVDLPYVDIQQCI 507
           ND ++P    F   LD K ++EGN  +        +D  +  V+K TV   Y+ +Q  +
Sbjct: 512 NDILRPYVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLL 570


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 184 KLYRPWNNQHDAYAQKSDVDEIKVPERYQGSATNFQDDIAIVILTNS 324
           +L + +N     +   SD D   +  R+Q ++ N +DD+ I +   S
Sbjct: 160 ELLKHFNYMKVIFIHSSDTDGRALLGRFQTTSQNLEDDVEIKVQVES 206


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 476 STVLSTCDAFSSSPVSPHPPTFP 408
           S +LST  +  +  V+P+PP  P
Sbjct: 80  SNLLSTSPSGQNKAVAPYPPNHP 102


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 476 STVLSTCDAFSSSPVSPHPPTFP 408
           S +LST  +  +  V+P+PP  P
Sbjct: 80  SNLLSTSPSGQNKAVAPYPPNHP 102


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 597  VTLTYRSAISVTGADLIAGN 538
            V   YR A++V G +LIA N
Sbjct: 1296 VNHAYRDAVTVPGNNLIATN 1315


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,913
Number of Sequences: 438
Number of extensions: 4061
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)