Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N18
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   3.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 368 LDFENIHGIFNQYIRIGNSGFNYKLLI 448
           LDF+    +F ++  + N  F YK+ +
Sbjct: 462 LDFQPRGSVFVRFTHLQNQDFTYKITV 488


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 120 IVSSPQNGALADKLIGSCVWGAVNYTSD 203
           I+++ Q+GA A       VW   N+T++
Sbjct: 81  IIANKQSGAAAPDARTQRVWSQYNFTNN 108


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 310 YLVFSKTSYVSHQQLTLAKLPQCP 239
           YLV +K   V H +  +  LP+ P
Sbjct: 29  YLVLNKYLLVKHSKPKMPLLPKTP 52


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = +3

Query: 63  KMVKNYSSLLLFVCITFLVI 122
           K++KN++ L++  C+   ++
Sbjct: 120 KVMKNFAILIIPTCVAMFIV 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,427
Number of Sequences: 336
Number of extensions: 2612
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)