Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N18
(533 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 26 0.21
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 25 0.37
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 25 0.49
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 4.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 4.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 4.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 4.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 6.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 6.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 6.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 6.0
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 26.2 bits (55), Expect = 0.21
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 180 GAVNYTSDCNAECKRRGYRGGHCGSFANVNCWC 278
G VN S C A C G GGHC V C C
Sbjct: 53 GQVN-DSACAANCLSLGKAGGHC---EKVGCIC 81
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 25.4 bits (53), Expect = 0.37
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 180 GAVNYTSDCNAECKRRGYRGGHC 248
G VN S C A C G GGHC
Sbjct: 28 GQVN-DSACAANCHSLGKAGGHC 49
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 25.0 bits (52), Expect = 0.49
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 180 GAVNYTSDCNAECKRRGYRGGHC 248
G VN S C A C G GGHC
Sbjct: 53 GQVN-DSACAANCLSLGKAGGHC 74
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -3
Query: 387 WIFSKSNSV*YYWRSMLILVKFVRLYIL 304
W+ +S +YW ++L+ L IL
Sbjct: 79 WVIHPCSSFRFYWDLCMLLLLVANLIIL 106
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -3
Query: 387 WIFSKSNSV*YYWRSMLILVKFVRLYIL 304
W+ +S +YW ++L+ L IL
Sbjct: 79 WVIHPCSSFRFYWDLCMLLLLVANLIIL 106
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -3
Query: 387 WIFSKSNSV*YYWRSMLILVKFVRLYIL 304
W+ +S +YW ++L+ L IL
Sbjct: 79 WVIHPCSSFRFYWDLCMLLLLVANLIIL 106
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -2
Query: 286 YVSHQQLTLAKLPQCPPLYPRLLHSALQSEV*LTAPHTQ 170
Y QQ A P ++PR A Q + +T+P +Q
Sbjct: 204 YQQQQQSQAASQQSQPGMHPRQQQQAQQHQGVVTSPLSQ 242
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 6.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 78 YSSLLLFVCITFL 116
Y+SLL FVC+ ++
Sbjct: 375 YASLLEFVCVNYV 387
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 6.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 78 YSSLLLFVCITFL 116
Y+SLL FVC+ ++
Sbjct: 344 YASLLEFVCVNYV 356
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 6.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 78 YSSLLLFVCITFL 116
Y+SLL FVC+ ++
Sbjct: 395 YASLLEFVCVNYV 407
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 6.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 78 YSSLLLFVCITFL 116
Y+SLL FVC+ ++
Sbjct: 344 YASLLEFVCVNYV 356
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,062
Number of Sequences: 438
Number of extensions: 2999
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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