Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N17
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    25   0.87 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   1.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.1  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   8.1  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 606 GYY*ILRXYYKKVS*RFADMYSRIKIQTVIYENYI 502
           G+Y  L+ + KKV  + A + SRI  Q V+  N I
Sbjct: 39  GWYQTLQTHMKKVREQMAGILSRIPEQGVVNWNKI 73


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -3

Query: 531 IQTVIYENYIIYVIDYSNFALYVVHNKNN 445
           +Q+  Y N  +Y+ D   +AL + +N ++
Sbjct: 190 VQSFDYNNTWVYIADVEGYALIIYNNADD 218


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 504 IIYVIDYSNFALYVVHNKNN 445
           ++Y+ D   FAL + +N +N
Sbjct: 200 LVYIGDNEGFALIIYNNSDN 219


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 516 YENYIIYVIDYSNFALYVVHNKNN*DKIKF 427
           Y NY  Y  +Y+N+  Y  +  NN  K+ +
Sbjct: 324 YSNYNNYNNNYNNYNNYNNNYNNNYKKLYY 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,052
Number of Sequences: 438
Number of extensions: 3716
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)