Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N15
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.62 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 204 TRPPSISGALVISETSRTESPAFLSAVAV 118
           TR  +  G LVI+E   T++PAF + + V
Sbjct: 211 TRLSATKGRLVITEPVGTKAPAFSTDIKV 239


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 80  KLCLKSASPSYLTR*VTLIFHWMPCL 3
           ++C+ + +P      +TLI  WMP L
Sbjct: 483 RICVSAWNPKDCDPLITLIETWMPLL 508


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 137 NAGLSVLDVSDITKAPEMLGGRVKTLH 217
           N  L+ L  +  TKA  ++ GR+ TLH
Sbjct: 556 NVQLTKLTKNCATKAQSVVLGRICTLH 582


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,397
Number of Sequences: 336
Number of extensions: 2312
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)