Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N15
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 240 6e-64
U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical p... 32 0.34
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.80
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 29 3.2
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 9.8
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 27 9.8
AL117201-4|CAB55064.2| 266|Caenorhabditis elegans Hypothetical ... 27 9.8
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 9.8
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 27 9.8
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 27 9.8
AF039048-7|AAB94234.2| 688|Caenorhabditis elegans Hypothetical ... 27 9.8
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 27 9.8
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 240 bits (587), Expect = 6e-64
Identities = 118/191 (61%), Positives = 145/191 (75%)
Frame = +2
Query: 8 MASNGKLALLSVSDKTGLLILGKALSEMGLQLVGSGGTATALRNAGLSVLDVSDITKAPE 187
M LA++SVSDKTGL+ L L GL L+ SGGTA A+R+ G+ V DV+D+TK PE
Sbjct: 1 MTDGKSLAIISVSDKTGLIPLAHGLVSAGLTLIASGGTAKAIRDQGIDVHDVADVTKFPE 60
Query: 188 MLGGRVKTLHPAVHAGILARLSNTDQEDMKRQNFEMISVVVCNLYPFVQTVAKSDVTVAD 367
MLGGRVKTLHPAVH GILAR + +D++D+++ N +SVVVCNLYPF +TV D +V +
Sbjct: 61 MLGGRVKTLHPAVHGGILARDTESDRKDLEKHNISFVSVVVCNLYPFKKTVQSKDCSVEE 120
Query: 368 AVENIDIGGVTLLRAAAKNHDRVTVICDPNDYDVIINEMKQSKDHQTSAETRQRLALKAF 547
AVENIDIGGVTLLRAAAKNH+RV+VICDP DYD II+E+K T+ E RQ LALKAF
Sbjct: 121 AVENIDIGGVTLLRAAAKNHERVSVICDPADYDHIISELKSG---GTTRERRQLLALKAF 177
Query: 548 THTSEYDLAIS 580
HT+ YD +IS
Sbjct: 178 EHTTSYDESIS 188
>U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical
protein T14B4.1 protein.
Length = 1146
Score = 31.9 bits (69), Expect = 0.34
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Frame = +2
Query: 131 LRNAGLSVLDVSDITKAPEMLGGRVKT-----LHPAVHAGIL-ARLSNTDQEDMKRQNFE 292
L + G+S++ V+ + P LGG +T + V A +L A+ +N M +N++
Sbjct: 986 LNDGGISLIVVASLVDKPNNLGGICRTSEIFGVDTLVVADVLVAQDANFKALSMSSENWQ 1045
Query: 293 MI-SVVVCNLYPFVQTVAKSDVTVADAVENID 385
I V NL P++Q + + TV A + D
Sbjct: 1046 KIEGVKRTNLLPYLQNLRANGYTVIAAEQTTD 1077
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 30.7 bits (66), Expect = 0.80
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +2
Query: 101 LVGSG----GTATALRNAGLSVLDVSDITKAPEMLGGRVKTLHPAVHAGILARLSNTDQE 268
+VGSG G A ++G +V+ ++D+ K + L +K + +V + + TD+E
Sbjct: 16 IVGSGQMGSGIAQVTASSGFNVM-LADVNK--KALDRAMKAISQSV-THLSKKQKGTDKE 71
Query: 269 DMKRQNFEMISVVVCNLYPFVQTVAKSDVTVADAVENIDI 388
M + CN VA +D+ + A+ENID+
Sbjct: 72 KSDFVTLTMSRIKTCNNVS--TAVADADLIIEAAIENIDL 109
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 224 VHAGILARLSNTDQEDMKRQNFEMISVVVCNLYPFVQTVAKSDVTVADAVENIDIGGV 397
V GI++ L + + K N M+ VV C+ +Q V SD T A+EN+D V
Sbjct: 217 VQVGIVSGLYGREMD--KEDNSTMV-VVNCSEVQTMQFVVFSDNTFVHAIENVDKASV 271
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/82 (25%), Positives = 38/82 (46%)
Frame = -2
Query: 388 YIYIFNSVRNSDV*FSNCLNERIKVANDHAYHFKVLTLHILLIGVRKSSQYAGVNSRM*G 209
Y++++NS R S ++ C E K+A ++ +F + L ++ G S + + G
Sbjct: 722 YLFVYNSQRASSFNYARCAIE--KLAETNSVNFDCILLLAVVKGGGSDSMKLNLENLTEG 779
Query: 208 LHTASKHFRRFSNI*DVKDRKS 143
RFS I D + RK+
Sbjct: 780 AELCKSIGARFSAI-DFRKRKT 800
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/82 (25%), Positives = 38/82 (46%)
Frame = -2
Query: 388 YIYIFNSVRNSDV*FSNCLNERIKVANDHAYHFKVLTLHILLIGVRKSSQYAGVNSRM*G 209
Y++++NS R S ++ C E K+A ++ +F + L ++ G S + + G
Sbjct: 722 YLFVYNSQRASSFNYARCAIE--KLAETNSVNFDCILLLAVVKGGGSDSMKLNLENLTEG 779
Query: 208 LHTASKHFRRFSNI*DVKDRKS 143
RFS I D + RK+
Sbjct: 780 AELCKSIGARFSAI-DFRKRKT 800
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
glp-1 protein.
Length = 1492
Score = 27.1 bits (57), Expect = 9.8
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 317 LYPFVQTVAKSDVTVADAVENIDIGGVTLLRAAAKNHDRVTVICDPNDYDVIINEMKQSK 496
+ P + ++S D + N D R K + +T DP+DYD +E+ Q K
Sbjct: 6 IMPMLAPQSRSSTLSYDNIPNFDF------RLRMKEYILLTFNADPHDYDSAFDELTQMK 59
Query: 497 --DHQTSAETRQRLALKAF 547
+ + Q L LK +
Sbjct: 60 FEANVPTPSVEQTLKLKRY 78
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 504 RPQQKPDKDWPSRLLHTPP 560
R +Q+ +DWP+R H PP
Sbjct: 240 RIEQQQAEDWPTRFQHPPP 258
>AL117201-4|CAB55064.2| 266|Caenorhabditis elegans Hypothetical
protein Y53H1C.2b protein.
Length = 266
Score = 27.1 bits (57), Expect = 9.8
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 317 LYPFVQTVAKSDVTVADAVENIDIGGVTLLRAAAKNHDRVTVICDPNDYDVIINEMKQSK 496
+ P + ++S D + N D R K + +T DP+DYD +E+ Q K
Sbjct: 6 IMPMLAPQSRSSTLSYDNIPNFDF------RLRMKEYILLTFNADPHDYDSAFDELTQMK 59
Query: 497 --DHQTSAETRQRLALKAF 547
+ + Q L LK +
Sbjct: 60 FEANVPTPSVEQTLKLKRY 78
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.1 bits (57), Expect = 9.8
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 317 LYPFVQTVAKSDVTVADAVENIDIGGVTLLRAAAKNHDRVTVICDPNDYDVIINEMKQSK 496
+ P + ++S D + N D R K + +T DP+DYD +E+ Q K
Sbjct: 6 IMPMLAPQSRSSTLSYDNIPNFDF------RLRMKEYILLTFNADPHDYDSAFDELTQMK 59
Query: 497 --DHQTSAETRQRLALKAF 547
+ + Q L LK +
Sbjct: 60 FEANVPTPSVEQTLKLKRY 78
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 233 GILARLSNTDQEDMKRQ-NFEMISVVVCNLYPFVQTVA 343
G+LARLS+ D+ ++ + NF++ ++V + F +TV+
Sbjct: 677 GVLARLSDQDRRELLEELNFKLNPLIVSLDHEFRETVS 714
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 233 GILARLSNTDQEDMKRQ-NFEMISVVVCNLYPFVQTVA 343
G+LARLS+ D+ ++ + NF++ ++V + F +TV+
Sbjct: 677 GVLARLSDQDRRELLEELNFKLNPLIVSLDHEFRETVS 714
>AF039048-7|AAB94234.2| 688|Caenorhabditis elegans Hypothetical
protein F16B4.3 protein.
Length = 688
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 80 LSEMGLQLVGSGGTATALRNAGLSVLDVSDITKAPEMLGGRVKTLHPAVHAGILARL 250
LS+ L ++ G + RN+ LS D+ + KA L ++ +HP H +L L
Sbjct: 561 LSKRKLVMIDLGEIMSWSRNSILSEADIQSLEKALNSLREHLRDVHP--HMSVLPTL 615
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 504 RPQQKPDKDWPSRLLHTPP 560
R +Q+ +DWP+R H PP
Sbjct: 240 RIEQQQAEDWPTRFQHPPP 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,220,208
Number of Sequences: 27780
Number of extensions: 223763
Number of successful extensions: 685
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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