Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N15
         (584 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.9  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    22   3.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   8.9  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 284 SDASYPPDRCSKV*PICRREQPDVRSSHGLQA 189
           ++AS P    + V P CRR++ ++ +++ L A
Sbjct: 85  AEASQPTSTTTSVTPSCRRQRYNIAAANPLLA 116


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 347 SDVTVADAVENIDIGGVTLLRAAAKNHDRVTVICDPNDYD 466
           SD  VA   E++ I G  +L      H++    C PN Y+
Sbjct: 40  SDWRVAGRSESVVIPGDIVLGGLFPVHEKGGASCGPNVYN 79


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 368 AVENIDIGGVTLLRAAAKNHDRVTVICDPNDYDVIINEMKQ 490
           AV  + +     + AA  +  R+  IC P  Y    +EMK+
Sbjct: 11  AVNVLFVNSFLFVIAAQDSSGRIFTICVPEIYSKECDEMKK 51


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 368 AVENIDIGGVTLLRAAAKNHDRVTVICDPNDYDVIINEMKQ 490
           AV  + +     + AA  +  R+  IC P  Y    +EMK+
Sbjct: 11  AVNVLFVNSFLFVIAAQDSSGRIFTICVPEIYSKECDEMKK 51


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 368 AVENIDIGGVTLLRAAAKNHDRVTVICDPNDYDVIINEMKQ 490
           AV  + +     + AA  +  R+  IC P  Y    +EMK+
Sbjct: 11  AVNVLFVNSFLFVIAAQDSSGRIFTICVPEIYSKECDEMKK 51


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 583 VRYGEVILGGVCKSLEGQS 527
           V +GE+++G +CK   G S
Sbjct: 91  VEHGELVMGILCKKTLGTS 109


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +2

Query: 125 TALRNAGLSVLDVSDIT---KAPEMLGGRVKTLHPAV 226
           +A +N  ++ +D S +     AP MLGGR  T +  V
Sbjct: 319 SAPQNLTVNFVDQSTVFLSWNAPHMLGGRTDTTYRVV 355


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 260 DQEDMKRQNFEMISVVVCNLYPFVQTVAKSDVTVADA 370
           D+E+  ++   +   +V  L PF+  V KS  ++ DA
Sbjct: 431 DREEALQKAGIVTYFIVRALKPFIPAVTKSLASLTDA 467


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,957
Number of Sequences: 438
Number of extensions: 2845
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)