Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N14
(589 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1187 + 24667044-24667091,24667196-24667274,24667520-246676... 32 0.39
12_02_0822 + 23453715-23454209 30 1.2
06_01_1092 + 8966584-8967053,8967737-8967854,8968030-8968253,896... 30 1.2
04_04_0079 + 22586803-22586923,22592541-22592860,22592991-225936... 30 1.6
01_05_0421 + 21990034-21990392,21991691-21992681 29 2.7
09_01_0150 - 2244757-2245303,2252925-2253277 28 4.8
02_04_0172 - 20595357-20596129,20596994-20597138 28 4.8
11_05_0009 - 18349593-18350477 28 6.3
08_02_0727 - 20456854-20456959,20457169-20457266,20457575-20457871 28 6.3
07_01_0618 + 4577417-4577430,4577838-4577874,4578070-4578173,457... 28 6.3
04_04_0081 + 22601090-22601395,22601714-22602522,22602584-22602611 28 6.3
02_01_0034 + 207750-207794,207956-207988,208007-208037,208409-20... 28 6.3
08_02_0929 + 22694917-22695072,22695399-22695781,22698637-226987... 27 8.4
07_03_0970 - 23034521-23034928,23036173-23037081 27 8.4
05_04_0334 - 20341186-20341422,20341509-20341569,20341652-203417... 27 8.4
02_02_0086 - 6647510-6648877 27 8.4
01_01_0220 + 1866989-1868393,1868465-1869153 27 8.4
>07_03_1187 +
24667044-24667091,24667196-24667274,24667520-24667695,
24668216-24668766,24669080-24669941
Length = 571
Score = 31.9 bits (69), Expect = 0.39
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = +3
Query: 42 TFWIYFILRVIADIWPTAGLALLGAACVIATRETSLGRGDVGRQLAFGTLGLAIFPPLAG 221
TFW++ + +VI + T GA T L R +GR L + +A F +
Sbjct: 392 TFWVFLVNKVIIPV--TRACFANGAEM------TQLQRIGIGRFLMIFAMAIAAFLEMKR 443
Query: 222 LAAEQMPDTPFVIPFALHAVFMLIGA 299
L + Q D P I + L F++ GA
Sbjct: 444 LESVQGGDQPLSIAWQLPQYFVIAGA 469
>12_02_0822 + 23453715-23454209
Length = 164
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = -1
Query: 379 IASTPVAVCHHHSGVDSGMWLSNNKIKAPINMNTACRANGITKGVSGICSAAKPANGGNI 200
+A+ AV H G D G W + +A + +G + + G C AA GG
Sbjct: 84 VAAPGAAVVEFHVGPDGGAWYQVDNRQAGSPVKVTVTPHG--RPLQGHCPAAGCRGGGQC 141
Query: 199 ANPNVPKASC 170
VP +C
Sbjct: 142 FADAVPGGNC 151
>06_01_1092 +
8966584-8967053,8967737-8967854,8968030-8968253,
8968352-8968588,8969122-8969275,8969356-8969438,
8969573-8969687,8969837-8969909,8970005-8970147
Length = 538
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 298 APINMNTACRANGITKGVSGICSAAKPANGG 206
A I++ T + GI V G C AA P+NGG
Sbjct: 296 AAISLPTQLASQGIISNVFGHCIAADPSNGG 326
>04_04_0079 +
22586803-22586923,22592541-22592860,22592991-22593623,
22593717-22594166
Length = 507
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 267 ALHAVFMLIGALILLFDSHMPLSTPEWWWHTATGVLAMPMNVV 395
A + +F++IG + ++ P W W + G+ A+P V+
Sbjct: 167 AAYHIFLVIGTVAATAANYFTDRIPGWGWRVSLGLAAVPATVI 209
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 386 HRHSKHARRRVPPPLGSR*WHVAIE*QNQSSNQHEHCMQSERYHERR 246
H H H PPP+ + +A + Q H+ MQS H+++
Sbjct: 158 HHHHHHQLLFSPPPVMAHHQELAALQEQQQQQHHQDVMQSPHQHQQQ 204
>09_01_0150 - 2244757-2245303,2252925-2253277
Length = 299
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +3
Query: 195 LAIFPPLAGLAAEQMPDTPFVIPFALHAVFMLIGALILLFDS-----HMPLSTPEWWWHT 359
+A+ +AGL A M + +PF L ++F+L+G + L++ S + +S E W H
Sbjct: 139 VALLVAMAGLLAFLMVKK-YYVPFLLLSLFVLVGFIFLVYFSVLCSFSVVVSVAEPWCHG 197
Query: 360 A 362
A
Sbjct: 198 A 198
>02_04_0172 - 20595357-20596129,20596994-20597138
Length = 305
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -1
Query: 166 PTSPRPNEVSRVAITHAAPNRARPAVGHMSAITLNIKYIQKVAVGSP 26
PTSP P VS A AP A A+GH S T+ AV P
Sbjct: 154 PTSPSPTSVSASAAGDEAPAMA-AAIGHESGPTVGEGAAWLAAVAVP 199
>11_05_0009 - 18349593-18350477
Length = 294
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 217 ANGGNIANPNVPKASCRPTSPRPNEVSRVAITHAAPNRARPAVGHMSAITLNIKY 53
A G NP+ P+++ R SPR V++ I +P R RP G + + I +
Sbjct: 69 AEPGVRPNPSRPRSATRSLSPR--HVTKTTIWRDSPAR-RPTTGELGLLKARILF 120
>08_02_0727 - 20456854-20456959,20457169-20457266,20457575-20457871
Length = 166
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 247 VSGICSAAKPANGGNIANPNVPKASCRPTSPRPNEVSR 134
V G+CS GG + ASC T+PR E SR
Sbjct: 40 VDGVCSQGGGGGGGEPLLRRIRAASCE-TAPRLREASR 76
>07_01_0618 +
4577417-4577430,4577838-4577874,4578070-4578173,
4578512-4578707,4579559-4579628,4579849-4579952,
4580296-4580335,4581016-4581070,4581418-4581426,
4582026-4582157,4582544-4582613,4583029-4583086,
4583173-4583228,4583315-4583470,4583589-4583700,
4583782-4583923,4584141-4584216,4584306-4584401,
4584509-4584637
Length = 551
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 379 IASTPVAVCHHHSGVDSGMWLSNNKIKAPINMNTAC 272
+A+T + ++HS D G++LS + ++ I N AC
Sbjct: 126 LAATTQELSYYHSEADIGIYLSYSDFQSYIIQNLAC 161
>04_04_0081 + 22601090-22601395,22601714-22602522,22602584-22602611
Length = 380
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +3
Query: 282 FMLIGALILLFDSHMPLSTPEWWWHTATGVLAMPMNVV 395
F++IG L ++ P W W + G+ A+P ++
Sbjct: 127 FVVIGILSATITNYFTNRIPGWGWRVSLGLAAVPGTII 164
>02_01_0034 +
207750-207794,207956-207988,208007-208037,208409-208505,
209238-209337
Length = 101
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -1
Query: 217 ANGGNIA-NPNVPKASCRPTSPRPNEVSRVAITHAAPNRARPAVGHMSAITLNIKYIQKV 41
AN N+A N NV K SC + + I+ P+ PA H S + L K +QK+
Sbjct: 2 ANPSNVATNGNVTKGSCCLLTLWVIPIVDDDIS--CPDLMPPAWLHASTLQLQYKLLQKI 59
Query: 40 AVGSPITSLH 11
+ S+H
Sbjct: 60 QIKKLAISIH 69
>08_02_0929 +
22694917-22695072,22695399-22695781,22698637-22698769,
22698870-22699312,22699786-22699864
Length = 397
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 530 CYT-HFCYGSVQLQNSPR*IGVDAA 459
CYT H CYGSV L ++P+ + A
Sbjct: 280 CYTGHQCYGSVGLASTPKLSSISGA 304
>07_03_0970 - 23034521-23034928,23036173-23037081
Length = 438
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -1
Query: 232 SAAKPANGGNIANPNVPKASCRPTSPRPNEVSRVAITHAAPNRA 101
+++ A G + +NPN A +P PN S A P A
Sbjct: 54 TSSASAAGSDPSNPNADPAQSSAANPNPNSSSSAAAASVPPGLA 97
>05_04_0334 -
20341186-20341422,20341509-20341569,20341652-20341719,
20341800-20342009,20342714-20342754,20342909-20342958,
20343069-20343157,20343233-20343307,20343498-20343598,
20343758-20343812,20343909-20344025,20344672-20344892,
20345525-20345582,20345706-20345822
Length = 499
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -1
Query: 262 GITKGVSGICSAAKPAN--GGNIANPNVPKASCRPTSPRPNEVSRVAI 125
G+ +G +G AA+P+N GG+ A P+V R + N+ + V+I
Sbjct: 451 GLKEGSAGAGVAAEPSNGGGGDTAGPSVKIEMMRRAAREGNDEAGVSI 498
>02_02_0086 - 6647510-6648877
Length = 455
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 178 ASCRPTSPRPNEVSRVAITHAAPNRARPAVGHMSAITLNIKYIQKVAVGSPITSL 14
AS PT+ R + H+ R A G A+T+ +K + + + G+ I+ +
Sbjct: 244 ASSSPTAWRDTAAHLAPLLHSDSRAVRMAAGEALAVTIEMKLVTRDSHGALISGV 298
>01_01_0220 + 1866989-1868393,1868465-1869153
Length = 697
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -1
Query: 319 LSNNKIKAPINMNTACRANGITKGVSGICSAAKPANGGNIANPNVPKA-SCRPTSPRPNE 143
+SNN + I + A G G +G+CSA P PN A + T P P
Sbjct: 206 VSNNLLTGRIPVAMAKFPVGAFGGNAGLCSAPLPPCKDEAQQPNASAAVNASATPPCPPA 265
Query: 142 VSRVAITHAA 113
+ VA + +A
Sbjct: 266 AAMVASSPSA 275
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,842,634
Number of Sequences: 37544
Number of extensions: 390640
Number of successful extensions: 1321
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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