Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N14
         (589 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF016679-5|AAB66157.1|  485|Caenorhabditis elegans Hypothetical ...    29   3.2  
U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    28   5.7  
AF038608-17|AAC25822.2|  425|Caenorhabditis elegans Hypothetical...    28   5.7  
Z81588-4|CAB04713.1|  413|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ...    27   7.5  
AL031624-1|CAA20940.1|  413|Caenorhabditis elegans Hypothetical ...    27   7.5  

>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
           protein K01A6.2 protein.
          Length = 1092

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 527 YTHFCYGSVQLQNSPR*IGVDAAP*CTEKRGDSEHRGCFSAVTTYNVHRHSKHARRRVPP 348
           Y+H+  G+++  +SPR  G D++P    K GD       +A ++ +   HSK   R   P
Sbjct: 392 YSHYNSGTLKSSSSPRDSGFDSSPTRYRKFGDPPE----TATSSADYDHHSKMFSRSSNP 447


>AF016679-5|AAB66157.1|  485|Caenorhabditis elegans Hypothetical
           protein T28C12.2 protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +3

Query: 147 LGRGDVGRQLAFGTLGLAIFPPLAGLAAEQM-PDTPFVIPFALHAVFMLIG-ALILLF 314
           LG    G    F +LG +I P +A +++  +   T +     L +VF+L+G ALIL+F
Sbjct: 408 LGPRKQGTMQGFFSLGGSIAPVIASISSTAIFKYTGYRYVIVLQSVFLLVGAALILIF 465


>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 211 GGNIANPNVPKASCRPTSPRP 149
           G + ANPNV   +  P SPRP
Sbjct: 646 GSSSANPNVEYVTASPNSPRP 666


>AF038608-17|AAC25822.2|  425|Caenorhabditis elegans Hypothetical
           protein C09G12.9 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = -1

Query: 232 SAAKPANGGNIANPNVPKASCRPTSPRPNEVSRVAITHAAPNRARPAVGHM 80
           SA  P+ G + ++   P  S +PT P P      A  +   +   P+ G M
Sbjct: 154 SATNPSAGSSASSTPTPYPSSQPTMPTPYPTGSGAAPYPPSSTPYPSAGAM 204


>Z81588-4|CAB04713.1|  413|Caenorhabditis elegans Hypothetical
           protein T07D10.4 protein.
          Length = 413

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
 Frame = -1

Query: 343 SGVDSGMWLSNNKI-------KAPINMNTACRANGITKGVSGICSAAKPANGGNIANPNV 185
           +G  +GMW SNN +       K P  +             S  C+A +  N   I +PN 
Sbjct: 256 NGYPTGMWYSNNCVDNNKYVCKRPAGVQCPAVPPTTVAPSSSYCNAGRLMNNAVITSPNY 315

Query: 184 PK 179
           P+
Sbjct: 316 PE 317


>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
            protein Y80D3A.2 protein.
          Length = 1467

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +2

Query: 182  RYIGIGNIPAVSWFS--RGANAGYAF 253
            RY G+GN+P V      + ANAG+AF
Sbjct: 1152 RYNGLGNLPHVDGLPQFQNANAGFAF 1177


>AL031624-1|CAA20940.1|  413|Caenorhabditis elegans Hypothetical
           protein H16D19.1 protein.
          Length = 413

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
 Frame = -1

Query: 343 SGVDSGMWLSNNKI-------KAPINMNTACRANGITKGVSGICSAAKPANGGNIANPNV 185
           +G  +GMW SNN +       K P  +             S  C+A +  N   I +PN 
Sbjct: 256 NGYPTGMWYSNNCVDNNKYVCKRPAGVQCPAVPPTTVAPSSSYCNAGRLMNNAVITSPNY 315

Query: 184 PK 179
           P+
Sbjct: 316 PE 317


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,005,687
Number of Sequences: 27780
Number of extensions: 293615
Number of successful extensions: 774
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)