Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N13
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.7  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -1

Query: 286 PARKMARCSR*VLDVDCNCCN 224
           P R    C   + D +CNC N
Sbjct: 114 PCRNNGSCVDRIADFECNCKN 134


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +1

Query: 184 WSRSKAGRKNSKFYYSS 234
           W ++ + +K +++YY S
Sbjct: 229 WKKNDSSKKKTRYYYRS 245


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 188 DHSSFHGYRLEKRVGCKRHVLGNKRQALAYVSRQVRVGVVDE 63
           D +S   Y +    GCK       R+ L+Y  R+ +  ++D+
Sbjct: 91  DRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKNCIIDK 132


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 350 YKWTQLNYLHDTNYSYIL 403
           Y+  QL+ L D N SYI+
Sbjct: 149 YRLYQLSVLIDNNMSYII 166


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 306 IAPRSAYEQRDDLSI 350
           +A +SAY Q+DDL I
Sbjct: 150 LASQSAYVQQDDLFI 164


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 306 IAPRSAYEQRDDLSI 350
           +A +SAY Q+DDL I
Sbjct: 150 LASQSAYVQQDDLFI 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,648
Number of Sequences: 336
Number of extensions: 2908
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)