Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N13
(652 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 1.9
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 2.6
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 2.6
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 3.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 5.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.9
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 5.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 7.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.8
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 95 KRTPRLDACYQAHVFCSRLSSQDGTRGNCY 184
+RT +D+ A + S LSS + GN Y
Sbjct: 76 RRTDSMDSQNSASTYNSFLSSDSASSGNVY 105
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 158 EKRVGCKRHVLGNKRQALAYV 96
EKRV CK GN A++++
Sbjct: 214 EKRVECKMEQQGNYENAVSHI 234
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -3
Query: 188 DHSSFHGYRLEKRVGCKRHVLGNKRQALAYVSRQVRVGVVDE 63
D +S Y + GCK R+ L+Y R+ + ++D+
Sbjct: 115 DRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 156
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 158 EKRVGCKRHVLGNKRQALAYV 96
EKRV CK GN A++++
Sbjct: 214 EKRVECKMEQQGNYENAVSHI 234
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -3
Query: 188 DHSSFHGYRLEKRVGCKRHVLGNKRQALAYVSRQVRVGVVDE 63
D +S Y + GCK R+ L+Y R+ + ++D+
Sbjct: 115 DRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 156
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 178 LLWSRSKAGRKNSKFYYSSYNPHPR 252
LL S + + N FY +SY P R
Sbjct: 8 LLGSEEEGNQLNRSFYSASYPPQNR 32
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +1
Query: 199 AGRKNSKFYY----SSYNPHPRPILNTS 270
AG ++K Y S+YN RP++NTS
Sbjct: 24 AGNPDAKRLYDDLLSNYNKLVRPVVNTS 51
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +1
Query: 199 AGRKNSKFYY----SSYNPHPRPILNTS 270
AG ++K Y S+YN RP++NTS
Sbjct: 24 AGNPDAKRLYDDLLSNYNKLVRPVVNTS 51
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 601 LNRR*SHIGNNFLLFLLKRNYCYTSTNYKPKSFY 500
L+ + H NN+ + Y Y + NY K +Y
Sbjct: 85 LSNKTIHNNNNYK-YNYNNKYNYNNNNYNKKLYY 117
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 104 AYVSRQVRVGVVDEMHEFPRGFPGQQ 27
A ++ Q++ G+V E P+G G++
Sbjct: 208 ATLADQIKNGIVSPQEERPKGINGRR 233
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 104 AYVSRQVRVGVVDEMHEFPRGFPGQQ 27
A ++ Q++ G+V E P+G G++
Sbjct: 203 ATLADQIKNGIVSPQEERPKGINGRR 228
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 557 SFKKKLLLYLNELQTKKFL 501
SFK+K+ Y N +KFL
Sbjct: 301 SFKRKVNFYPNNQDIEKFL 319
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 34 PGKPRGNSCISSTTP 78
P P+G+ C TTP
Sbjct: 276 PATPKGSKCSMITTP 290
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,102
Number of Sequences: 438
Number of extensions: 3646
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -