Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N09
(449 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 67 1e-12
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 58 6e-10
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 55 6e-09
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 52 5e-08
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 37 0.001
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 28 0.58
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 28 0.76
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 28 0.76
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 27 1.3
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 3.1
SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 25 4.1
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 25 4.1
SPAC3A11.07 |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 25 5.4
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 25 5.4
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 7.1
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 25 7.1
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 24 9.4
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 24 9.4
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 24 9.4
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 67.3 bits (157), Expect = 1e-12
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Frame = +2
Query: 2 DSSKEVTDEER----DQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQ 169
+ SKE+ D E D+++E R + F + AIK YTE P F R
Sbjct: 382 EKSKELQDREAYIDPDKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAA 441
Query: 170 VYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKID-YDD 346
YLK+ P CI+DC A+EL+ + A AY + +A +L + + E+ ++D +
Sbjct: 442 AYLKVMAPAECIRDCNKAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREP 501
Query: 347 QTNEWLNEVKPNAEKLRQHKLSMQRKKEDKE 439
T + L E++ K ++ QR+ E +E
Sbjct: 502 NTGKNLREIESQLSKC-MSAMASQRQNETEE 531
Score = 33.9 bits (74), Expect = 0.012
Identities = 27/113 (23%), Positives = 51/113 (45%)
Frame = +2
Query: 2 DSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLK 181
++ K+ D+E+ +E + + QY +A Y + +N +A +F +
Sbjct: 259 EALKKKADQEKQIGNENYKKRNFPVAIEQYKKAWDTYKDITYLNNLAAAYF--------E 310
Query: 182 LNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKIDY 340
++ + CIK C A+E + A +K +A LG + DL ++ IDY
Sbjct: 311 ADQLDDCIKTCEDAIEQGRELRADFKLIAKALGRLGTTYQKRGDLVKA--IDY 361
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 58.0 bits (134), Expect = 6e-10
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Frame = +2
Query: 2 DSSKEVTDEERDQ-SDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYL 178
+S K +T EER + + E ++ +A+ + +Y AI YT+AI + +FF+ R Y
Sbjct: 137 ESVKSMTKEERAKLAAELKTLGNKAYGQKEYANAIDYYTQAITCS-HDPIFFSNRAACYA 195
Query: 179 KLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKIDYDDQTNE 358
+ IKD + AL L+ A R AY LGK +EA D ++ +D NE
Sbjct: 196 AIGDFEQVIKDTSEALSLDSSYVKALNRRSAAYEQLGKLDEALMD--STVSCIFDGFANE 253
Query: 359 WLN-EVKPNAEKLRQHKLSMQRKK 427
+ V+ +K+ + K S K+
Sbjct: 254 SMTATVERLLKKVAEKKSSALLKE 277
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 54.8 bits (126), Expect = 6e-09
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = +2
Query: 44 DEKRSEAMRAFSEHQYNEAIKLYTEAILINPQS----ALFFAKRGQVYLKLNKPNACIKD 211
+ +++ F + Y +A + Y+EA+ I+P + A + R V L+L +P + D
Sbjct: 224 ENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSD 283
Query: 212 CTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKIDYDD 346
+AL ++ K R +A+ L K+EEA D+ ++++D D
Sbjct: 284 SDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELDASD 328
Score = 39.1 bits (87), Expect = 3e-04
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 2 DSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSAL--FFAKRGQVY 175
++ E E + ++++++ + E +Y EAIK YTEAI + SAL +++ R Y
Sbjct: 10 NAGTESQQEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATY 69
Query: 176 LKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEA 304
+++ + + D + + D +AY L EA
Sbjct: 70 MQIGEFELALCDAKQSDRIKPDVPKTQSRIRQAYEGLSILNEA 112
Score = 28.3 bits (60), Expect = 0.58
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +2
Query: 161 RGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKIDY 340
+ QVY+ N + K L LN + A RG+ G+ +A E+LK+D
Sbjct: 149 KAQVYIFQNDMDRAQKIAHDVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDP 208
Query: 341 DDQTNEWL 364
D T + L
Sbjct: 209 DCTTAKTL 216
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 51.6 bits (118), Expect = 5e-08
Identities = 33/116 (28%), Positives = 58/116 (50%)
Frame = +2
Query: 2 DSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLK 181
DS+ V EE +++ + E A + Y +A+ LYT+AI I+P S ++++ R Y +
Sbjct: 73 DSTAHVNKEE---AEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQ 129
Query: 182 LNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKIDYDDQ 349
L + ++D L L+ A A+ GRA LG A+ + L D +++
Sbjct: 130 LGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDFDPNNE 185
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 37.1 bits (82), Expect = 0.001
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 89 YNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELN 235
Y + + T A++INP +RG YL+L P+ +D H+LEL+
Sbjct: 57 YTKVVHDCTYALVINPYDKKVIWRRGLAYLRLGHPHLANRDWEHSLELD 105
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 28.3 bits (60), Expect = 0.58
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 386 QRLASPH*AIHWFDHHNQS*EIHRDRAKLL 297
+RL +PH H+FD H + + DR LL
Sbjct: 315 RRLDNPHIHYHYFDFHKECSHMRWDRVSLL 344
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 27.9 bits (59), Expect = 0.76
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 200 CIKDCTHALELNCDSAAAYKFRGRAYRLLG-KFEEASHDLCESLKIDYDDQTNEW 361
C ++ ++L D+A Y F + YRL FE SH ESL TN W
Sbjct: 348 CTQETVYSLLTGNDTACVYPFPNKPYRLPDVDFEIFSHCSFESL-TTVTTNTNIW 401
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 27.9 bits (59), Expect = 0.76
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Frame = +2
Query: 38 QSDEKRSEAMRAFSEHQYNEAIKLY-------------TEAILINPQSALFFAKRGQVYL 178
Q ++ + A AF +Y EA KLY +IL ++++ R +
Sbjct: 61 QVNKMKQTANEAFKRKKYEEAKKLYGLALQLALNRCTWEPSILTREEASVMLCNRAAAEI 120
Query: 179 KLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESL 328
L++ + D AL++ + Y + +A + + EEA + + L
Sbjct: 121 ALSQFPEALADANAALKIRNNYGKCYYRKAKALEAMHRIEEAKQVVRDGL 170
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 27.1 bits (57), Expect = 1.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 260 FRGRAYRLLGKFEEASHDLCESL 328
FRGRAY L S+D+C L
Sbjct: 668 FRGRAYPLSSHLHHVSNDVCRGL 690
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.8 bits (54), Expect = 3.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 74 FSEHQYNEAIKLYTEAILINPQ 139
+++ Y A+KLY A++ NPQ
Sbjct: 186 YAKGNYRSALKLYQRALVSNPQ 207
>SPAC3A12.13c |||translation initiation factor eIF3 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 25.4 bits (53), Expect = 4.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 283 QPVSTTTELVRGGAVTVELKSMCTVFDAS 197
+PVST +GG TV + S TV D S
Sbjct: 225 KPVSTAAPSKKGGKPTVNVNSKKTVADKS 253
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.4 bits (53), Expect = 4.1
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 201 ASKTVHMLLSSTVTAPPRTSSVVVLTGCWVSSKKLRTISVNL 326
A K + +LL+STV + + V L + K +RT+SVNL
Sbjct: 473 ALKRLRILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNL 514
>SPAC3A11.07 |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 25.0 bits (52), Expect = 5.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 249 PRTSSVVVLTGCWVSSKKLRTISVNLSRLIMMIKPMN 359
P ++VVL W ++ LRTI +L +I ++ P N
Sbjct: 89 PSKKTLVVLGAGWGATSILRTIDTSLFNVI-VVSPRN 124
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.0 bits (52), Expect = 5.4
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = +3
Query: 12 RKLPMRNEISLMRNVQKL*EHSPSI 86
+KLP++ S++R++++L E +PS+
Sbjct: 177 KKLPLKFAYSILRDLKELLEKTPSL 201
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 24.6 bits (51), Expect = 7.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 83 HQYNEAIKLYTEAILINPQSALFFAKRGQVY 175
+QY +A+ Y+ AI +NP + + G +Y
Sbjct: 632 NQYQDALDAYSRAIRLNPYISEVWYDLGTLY 662
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 24.6 bits (51), Expect = 7.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 251 AYKFRGRAYRLLGKFEEASHDLCESLKID 337
A+K+ GR + LLG L E++K+D
Sbjct: 330 AWKWLGRIHTLLGNESRVVEALLEAVKLD 358
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 24.2 bits (50), Expect = 9.4
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +2
Query: 86 QYNEAIK-LYTEAILINPQSALFFAKRGQVYLKL-NKPNACIKDCTHALELNCDSAAAYK 259
Q N +K L +A++I + + ++ +K KP I D H L DS AYK
Sbjct: 1245 QVNNFLKPLIVQAMIITGTNTDAGDENRKLRIKFFEKPKYKITDVIHVLNKVHDSCQAYK 1304
Query: 260 FRGRAYRLL 286
Y L
Sbjct: 1305 VNYEIYNAL 1313
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 24.2 bits (50), Expect = 9.4
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Frame = +2
Query: 8 SKEVTDEERDQSDEKRSEAMRAFSEH---QYNEAIKLYTEAILINPQSALFFAKRGQVYL 178
+K++ D +E + + EH Q N A ++ QS + A G +
Sbjct: 24 AKQLIASSSDSEEESELDTNKQALEHINAQKNITHNENKSAEPLSRQSTILDADEGNQDV 83
Query: 179 KLNKPNACIKDCTHA 223
PNAC+ + H+
Sbjct: 84 SDTTPNACLNEGRHS 98
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 24.2 bits (50), Expect = 9.4
Identities = 17/87 (19%), Positives = 37/87 (42%)
Frame = +2
Query: 77 SEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAY 256
+ +Y ++ + +AI +N + + G VYLK + + A E+N +++
Sbjct: 477 ANEEYEKSKTSFRKAIRVNVRHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLI 536
Query: 257 KFRGRAYRLLGKFEEASHDLCESLKID 337
G Y +++A + K+D
Sbjct: 537 TCIGMIYERCKDYKKALDFYDRACKLD 563
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,596,149
Number of Sequences: 5004
Number of extensions: 28633
Number of successful extensions: 119
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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