Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N09
(449 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 124 3e-29
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 8e-09
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 57 8e-09
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 48 5e-06
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36) 47 6e-06
SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10) 47 8e-06
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 42 2e-04
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 42 2e-04
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 40 0.001
SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06) 40 0.001
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 38 0.005
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0) 36 0.020
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 34 0.062
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 34 0.062
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.082
SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13) 33 0.11
SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20) 33 0.14
SB_1702| Best HMM Match : TPR_2 (HMM E-Value=5.5e-23) 32 0.25
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.33
SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05) 31 0.44
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 31 0.58
SB_44021| Best HMM Match : DUF622 (HMM E-Value=0.34) 31 0.58
SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0) 30 0.77
SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06) 29 1.3
SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82) 29 1.8
SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0) 29 1.8
SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24) 29 1.8
SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0) 28 3.1
SB_1740| Best HMM Match : Protamine_P2 (HMM E-Value=0.9) 28 3.1
SB_59121| Best HMM Match : TPR_1 (HMM E-Value=7.4e-10) 28 3.1
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 28 4.1
SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 28 4.1
SB_59790| Best HMM Match : VWA (HMM E-Value=0) 27 5.4
SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_21748| Best HMM Match : TPR_1 (HMM E-Value=0) 27 7.2
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 27 7.2
SB_10260| Best HMM Match : B1 (HMM E-Value=7.6) 27 7.2
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_51616| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 124 bits (299), Expect = 3e-29
Identities = 54/104 (51%), Positives = 75/104 (72%)
Frame = +2
Query: 95 EAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRA 274
EAIKL+T+AI+ NP SA FAKR ++++ KPNA I+DC A ++N DSA YK+RGRA
Sbjct: 66 EAIKLFTDAIMKNPHSAPLFAKRASCFIRMKKPNAAIRDCDKAAQINPDSAQIYKWRGRA 125
Query: 275 YRLLGKFEEASHDLCESLKIDYDDQTNEWLNEVKPNAEKLRQHK 406
+ LG +E+A DL ++LK+D+D+Q NEW +V P EK R+ K
Sbjct: 126 HEFLGHWEKADKDLAQALKLDFDEQVNEWFKDVHPKEEKERKRK 169
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 92 NEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELNCD 241
N AI+ +A INP SA + RG+ + L KD AL+L+ D
Sbjct: 99 NAAIRDCDKAAQINPDSAQIYKWRGRAHEFLGHWEKADKDLAQALKLDFD 148
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 68.9 bits (161), Expect = 2e-12
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Frame = +2
Query: 17 VTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPN 196
+ DEE+ ++ + + + A S +AI+ YTEAIL++P + +F++ R + KL+K N
Sbjct: 1 MADEEKAKAAKLKDQGNAALSAGDTQKAIEFYTEAILLDPANHVFYSNRSAAFAKLSKYN 60
Query: 197 ACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKIDYDD-QTNEWLNEV 373
++D +E+ D Y G AY L +++A L+ D ++ Q L EV
Sbjct: 61 EALEDARKCVEIKPDWGKGYSRLGTAYSFLKMYQKAEEAFTTGLRHDPNNAQLKSGLEEV 120
Query: 374 KPNA 385
+ NA
Sbjct: 121 QSNA 124
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/110 (20%), Positives = 51/110 (46%)
Frame = +2
Query: 2 DSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLK 181
++ E+ + E+ +EK A+ + ++ A K + A +NP + F+ + +
Sbjct: 218 ETEPELAENEKKAMEEKEL-GNAAYKKKDFDTAHKHFNNAKELNPDNMTFYTNNAAAFFE 276
Query: 182 LNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLK 331
CIK+C A+E+ + A + G+A+ +G ++ +++K
Sbjct: 277 EGNYEECIKECLEAVEVGRSNRAEFALIGKAFARIGNSYAKQNNYKDAIK 326
Score = 35.5 bits (78), Expect = 0.020
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 38 QSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCT 217
+S E++ + F + + A K YTEAI NP+ A ++ R + KL N +++
Sbjct: 364 KSAEEKEKGNEYFKKGDFPSAQKHYTEAIKRNPEDAKLYSNRAATFQKLAAFNLALEEAK 423
Query: 218 HAL 226
L
Sbjct: 424 EGL 426
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +2
Query: 128 INPQSALFFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEAS 307
I+P + ++G Y K + K T A++ N + A Y R ++ L F A
Sbjct: 360 IDPVKSAEEKEKGNEYFKKGDFPSAQKHYTEAIKRNPEDAKLYSNRAATFQKLAAFNLAL 419
Query: 308 HDLCESLK 331
+ E L+
Sbjct: 420 EEAKEGLR 427
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 56.8 bits (131), Expect = 8e-09
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +2
Query: 50 KRSEAMRAFSEHQYNEAIKLYTEAILINPQS----ALFFAKRGQVYLKLNKPNACIKDCT 217
K+ E AF+ Y +A +LYTEA+ I+P++ A + R V KL K + I+DCT
Sbjct: 36 KKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCT 95
Query: 218 HALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESL 328
A+ L+ AY R Y K+EEA D ESL
Sbjct: 96 QAMNLDHTYTKAYLKRANCYMESEKYEEAVRDY-ESL 131
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 56.8 bits (131), Expect = 8e-09
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +2
Query: 50 KRSEAMRAFSEHQYNEAIKLYTEAILINPQS----ALFFAKRGQVYLKLNKPNACIKDCT 217
K+ E AF+ Y +A +LYTEA+ I+P++ A + R V KL K + I+DCT
Sbjct: 36 KKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCT 95
Query: 218 HALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESL 328
A+ L+ AY R Y K+EEA D ESL
Sbjct: 96 QAMNLDHTYTKAYLKRANCYMESEKYEEAVRDY-ESL 131
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 47.6 bits (108), Expect = 5e-06
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +2
Query: 35 DQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQS-----ALFFAKRGQVYLKLNKPNA 199
+Q+ + + + F +Y +AIK YTEAI + P + F+ R Y ++N+
Sbjct: 139 EQAQVAKLKGNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAYEQMNQFEN 198
Query: 200 CIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDL 316
+++ T ALELN A R RA L + +E DL
Sbjct: 199 VVEEATKALELNSKYTKALMRRARALEKLERKQECLQDL 237
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 47.6 bits (108), Expect = 5e-06
Identities = 33/130 (25%), Positives = 65/130 (50%)
Frame = +2
Query: 2 DSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLK 181
+S ++T++ R EK A A S+ + +A++LY+EAI ++P + + + R ++
Sbjct: 9 ESKVDLTEQSRPGLHEKAKWAGDACSKGDFQKAVELYSEAIKLDPNNHVLYGNRSAACIR 68
Query: 182 LNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKIDYDDQTNEW 361
+ ++D A ELN A+ +G A + +G+ EA +L D+++ +
Sbjct: 69 TWQLEQALEDGKKAAELNPLWPKAHYRQGVALQCMGRHAEALAAFATALA--QDEKSPQL 126
Query: 362 LNEVKPNAEK 391
LN + A K
Sbjct: 127 LNTLLDAALK 136
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 152 FAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESL 328
+ KRG+ Y L N I+D L + +AY + +AYR LG + + +L ++L
Sbjct: 842 YGKRGECYHLLGDSNEAIRDYEKYLAAAQQAESAYD-QDKAYRGLGVALKTTGNLQQAL 899
>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
Length = 1021
Score = 47.2 bits (107), Expect = 6e-06
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +2
Query: 26 EERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSAL-FFAKRGQVYLKLNKPNAC 202
E++ S E SE +R A+ +T AI+++P+ A + +RG+ Y KL KP
Sbjct: 603 EKQKVSREAYSEGLRLVGRDNDGAAVSYFTLAIILSPKQAWEAYHQRGKRYFKLKKPRHA 662
Query: 203 IKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKID 337
++D T L + A R K++EA D +LKI+
Sbjct: 663 LQDFTAVLSMRPKHIEALCGRAVINLTACKYQEAVGDFLAALKIN 707
>SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10)
Length = 452
Score = 46.8 bits (106), Expect = 8e-06
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 5 SSKEVTDEERDQSDEK--RSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYL 178
+ +E ++ +DE+ RSE + +Y AI LY ++IL +P + + +R ++
Sbjct: 270 TEEEFENDNVYPTDERYYRSEGNKKMISKEYRTAIDLYNKSILASPINYFSWCQRATAFI 329
Query: 179 KLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEA 304
LNK + D ++LN Y FRG + L ++++A
Sbjct: 330 SLNKYEESLLDFEECIKLNPKWVKGYLFRGLSQLHLRQYKDA 371
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/92 (28%), Positives = 42/92 (45%)
Frame = +2
Query: 38 QSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCT 217
++++ + +A F E YN AI YT+AI + ++ R YLK + D
Sbjct: 186 EAEDLKLKANGYFKEGNYNSAITFYTQAIELKADVPAYYGNRSFCYLKTEYYGLALADAN 245
Query: 218 HALELNCDSAAAYKFRGRAYRLLGKFEEASHD 313
A++L+ Y R A LGKF+ + D
Sbjct: 246 KAIQLDRKYIKGYYRRATANMALGKFKLSLKD 277
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 44.0 bits (99), Expect = 6e-05
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Frame = +2
Query: 17 VTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPN 196
V + + ++++ R + A ++ EA+ YT+ I + F+ R +LKLNKP
Sbjct: 856 VASDLQKKANDFREKGNDAVKREEFQEALDWYTKGIELTKTDHRLFSNRALCHLKLNKPK 915
Query: 197 ACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFE-EASH----DLCESLKIDYDDQT 352
+ DC L+L A + + A L + + H LC + Y D+T
Sbjct: 916 EALADCESCLKLEEHFGKALQRKAWALHELSRLHPDDKHIQGRSLCAASLAQYFDRT 972
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +2
Query: 89 YNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRG 268
Y AI+L+T+AI ++ + FF R + +L + ++D A+ L D + RG
Sbjct: 285 YQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDADVAISLAPDWPKGFFRRG 344
Query: 269 RAYRLLGKFEEASHDLCESLKID 337
RA L F +A LK+D
Sbjct: 345 RALAGLKLFSDAEGAFAHVLKLD 367
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 74 FSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAA 253
F + +Y +A+ Y+ A+ + P R + YLKL K +A +D ALE + D
Sbjct: 27 FKQEEYQKALDSYSLALELKPTDPFCLVARSKCYLKLGKNDAAYRDAEAALEEDKDFNKG 86
Query: 254 YKFRGRAYRLLGKFEEA 304
+ A +G FE A
Sbjct: 87 LYQKAEALYAMGDFEYA 103
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Frame = +2
Query: 47 EKRSEAMRAFSEHQYNEAIKLYTEAILI----------NPQSALFFAKRGQVYLKLNKPN 196
E + E + F Y A+ Y A+ + + A+ + R LKL K
Sbjct: 11 EIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQLKLEKYE 70
Query: 197 ACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHD 313
A IKD T AL++ + A R +A+ G+ EEA D
Sbjct: 71 AAIKDATKALDIVPNDPKALFRRSQAFEATGRLEEAFKD 109
Score = 26.6 bits (56), Expect = 9.5
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Frame = +2
Query: 131 NPQSALFFAKRGQVYLKLNKPNACIKDCTHALEL----------NCDSAAAYKFRGRAYR 280
NP+SA+ + G Y K A + AL+L + A YK R
Sbjct: 5 NPKSAVEIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQL 64
Query: 281 LLGKFEEASHDLCESLKIDYDD 346
L K+E A D ++L I +D
Sbjct: 65 KLEKYEAAIKDATKALDIVPND 86
>SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06)
Length = 357
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Frame = +2
Query: 53 RSEAMRAFSEHQYNEAIKLYTEAILINPQS-----ALFFAKRGQVYLKLNKPNACIKDCT 217
R+E F + Q A+++YT++IL+ P + +L +A R V + + C++D
Sbjct: 71 RNEGNTYFQKRQLGRALEVYTQSILVAPSTDLKVLSLAYANRSAVLFHMKEYELCLRDIE 130
Query: 218 HALELNCDSAAAYKF---RGRAYRLLGKFEEA 304
A ++ YK + R+ + L + EE+
Sbjct: 131 FAQKMKYPGEMVYKILDRKARSLKALCRIEES 162
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +2
Query: 53 RSEAMRAFSEHQYNEAIKLYTEAILI------NPQSAL--FFAKRGQVYLKLNKPNACIK 208
+ E MR + +Y EA++ Y++AI + + +SAL R ++ + C+K
Sbjct: 419 KDEGMRLYKIGRYAEAVEKYSQAIDVLWKDKSHFKSALASLLYNRASCLGRIGDASGCVK 478
Query: 209 DCTHALELNCDSAAAYKFRGRAYRLLGK 292
DCT +L L DS A+ R + L K
Sbjct: 479 DCTSSLNLIPDSLKAHLKRAEQFEHLEK 506
Score = 33.9 bits (74), Expect = 0.062
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 206 KDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKIDYDDQTNEWLNEVKPNA 385
KD AL L D+ A R A + LGK++ A+ DL +KID + + + E+
Sbjct: 771 KDANTALGLQPDNVKALYRRALARKALGKYDTAAKDLLSLVKIDSKNMSGK--KELDTVL 828
Query: 386 EKLRQHKLSMQRKK 427
E R+ + Q+ +
Sbjct: 829 ELCRKERRETQKSQ 842
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 173 YLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKID 337
+LKL CIK C AL+++ ++ A RG+A L +E++ D + L++D
Sbjct: 1028 HLKLGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKDYEKSKEDFTQVLELD 1082
>SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 845
Score = 35.5 bits (78), Expect = 0.020
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Frame = +2
Query: 26 EERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKL------- 184
+ERDQ++E + + Y EAI+ Y EA+ + Q ++G+ +L +
Sbjct: 186 DERDQAEELMGRGRKYYDMDNYEEAIEHYKEALRLY-QKTSDDQRQGKAHLLIGNAHNLQ 244
Query: 185 NKPNACIKDCTHALEL------NCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKI 334
K I AL L + A+ F G A+ L GK+EEA E+L++
Sbjct: 245 GKYEEAIGHYKEALRLYQRTSDDQGQGKAHLFIGNAHNLQGKYEEAIGHYKEALRL 300
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 33.9 bits (74), Expect = 0.062
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 176 LKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEA 304
LKL + + I+DC AL+L+ +SA A RG+A + +EEA
Sbjct: 51 LKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEA 93
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 33.9 bits (74), Expect = 0.062
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 71 AFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNK 190
AF + +Y EA+KLYT+A+ + + F+ R Q+ K K
Sbjct: 130 AFKQQKYEEAVKLYTQALNQDRTNTAFYTNRAQLDKKCIK 169
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 33.9 bits (74), Expect = 0.062
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 176 LKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEA 304
LKL + + I+DC AL+L+ +SA A RG+A + +EEA
Sbjct: 378 LKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEA 420
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 33.5 bits (73), Expect = 0.082
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Frame = +2
Query: 89 YNEAIKLYTEAILINPQSALFFAK-RGQV---YLKLNKPNACIKDCTHALELNCDSAAAY 256
Y+EAI +A+ ++ K R Q+ +LKL IK+C AL ++ + A
Sbjct: 98 YHEAIDKLKKALRTESKNKPLVGKARRQLCHCHLKLGFSQEAIKECNAALSIDENDVDAL 157
Query: 257 KFRGRAYRLLGKFEEASHDLCESLKIDYDDQTNEWLNEVKPNAEKLRQHKLSMQRKKED 433
R AY L + EA +D ++ I NE L++V+ + R +L Q +K D
Sbjct: 158 CDRAEAYILEEMYNEAVNDFQKAKSI------NEHLHKVQEGLD--RAQRLLKQSQKRD 208
>SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13)
Length = 452
Score = 33.1 bits (72), Expect = 0.11
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +2
Query: 98 AIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAY 277
A + +T A+L+ P+SA F RG + KP + D + + A + Y
Sbjct: 217 AYEHFTAALLLEPRSAETFHLRGMLQYMNGKPALALNDFKACQSFDPQNTACLYMKAVCY 276
Query: 278 RLLGKFEE 301
LG F E
Sbjct: 277 ATLGNFYE 284
>SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20)
Length = 1195
Score = 32.7 bits (71), Expect = 0.14
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 83 HQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELN 235
H + A+ Y EAI +NP A F +RG +KL+ + D AL +N
Sbjct: 1092 HNDSGALDAYNEAIKVNPDYAEAFYQRGLTKMKLSHTKG-VHDFNRALAIN 1141
>SB_1702| Best HMM Match : TPR_2 (HMM E-Value=5.5e-23)
Length = 310
Score = 31.9 bits (69), Expect = 0.25
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Frame = +2
Query: 83 HQYNEAIKLYTEAILINPQS------ALFFAKRGQVYLKLNKPNACIKDCTHALEL---- 232
H YN++++ + A+ ++ ++ A + G V++ K + +C HAL L
Sbjct: 28 HDYNQSMENFQHALSLSQKTGDESGQAKAYYGMGIVHMSQAKYEDAMNNCQHALSLFQKT 87
Query: 233 --NCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKI 334
A AY+ G Y GKFE+A ++ +L +
Sbjct: 88 GDESGQAKAYQGMGIMYLNQGKFEDAMNNYQHALNL 123
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 31.5 bits (68), Expect = 0.33
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +2
Query: 95 EAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRA 274
EA+ Y EAI I+P A F+ G + ++ I+ + A+++N A A+
Sbjct: 382 EALLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQGAIQCYSRAIQINPAFADAHSNLASV 441
Query: 275 YRLLGKFEEASHDLCESLKI 334
++ G EA +LK+
Sbjct: 442 HKDSGNIPEAIQSYRTALKL 461
>SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05)
Length = 190
Score = 31.1 bits (67), Expect = 0.44
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 209 DCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKID 337
DC AL L+ AY RG+A L K E+ D E+L+++
Sbjct: 107 DCDLALSLDYSYTKAYLRRGKARSHLNKLHESLSDFKEALRLE 149
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 30.7 bits (66), Expect = 0.58
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +2
Query: 365 NEVKPNAEKLRQHKLSMQRKKEDKEHRE 448
N+ + EK+RQ +L +QR++E+ EH+E
Sbjct: 1150 NKKERAREKMRQKQLRLQREREEAEHQE 1177
>SB_44021| Best HMM Match : DUF622 (HMM E-Value=0.34)
Length = 572
Score = 30.7 bits (66), Expect = 0.58
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Frame = +2
Query: 14 EVTDEERDQSDEKRSEAMRAFSE--HQY----NEAIKLYTEAILINPQSALFFAKRGQVY 175
E ++E+ + EK S + A+ E QY N +L T+ + P++A+
Sbjct: 112 ETAEKEKKELQEKLSNSFTAYKEKYQQYIDLQNTCRELKTK-LEEQPKNAMASVASSATS 170
Query: 176 LKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDLCESLKIDYDDQTN 355
K + A CTHA ++ CDS A K L K E D L I D+
Sbjct: 171 QKKEEKKA---HCTHATKVTCDSLANLKVLLGCCGL--KTLEDGED--RVLSITDKDKFL 223
Query: 356 EWLNEV 373
+WLN++
Sbjct: 224 KWLNDI 229
>SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1879
Score = 30.7 bits (66), Expect = 0.58
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 56 SEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKL 184
+E S +YN+ IKL EA +I AL+F +RG + K+
Sbjct: 1473 NEIFNTLSADEYNKIIKLL-EASIIATDLALYFQRRGDFFKKV 1514
>SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 357
Score = 30.3 bits (65), Expect = 0.77
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Frame = +2
Query: 20 TDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILI------NPQSALFFAKRGQVYLK 181
T E Q+D ++S + S Y EAIK Y +A+ + + A G VY
Sbjct: 85 TGNESKQADVRQSIGLVQQSLGNYEEAIKYYQQALQVYISTGNESKQAGVRLNIGAVYQS 144
Query: 182 LNKPNACIKDCTHALELNCDSAAAYKFR------GRAYRLLGKFEEASHDLCESLKI 334
L +K C AL++ + K G + LG +EEA ++L++
Sbjct: 145 LGNYEEAMKYCQQALQVYISTGNESKQADVRQNIGLVQQSLGNYEEAMKYYQQALQV 201
>SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06)
Length = 118
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 DSSKEVTDEER-DQSDEKRSEAMRAFSEHQYNEAIKLYTEAIL 127
D +KE+ E++ DQ+ + E F + Y EA+K Y A+L
Sbjct: 18 DHNKELNVEDKIDQAFSLKEEGNGCFKQKNYREAMKKYHRAML 60
>SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82)
Length = 1642
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 188 KPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEEASHD 313
K + IKDC E C+S+A F ++ G F++A D
Sbjct: 1185 KQSKDIKDCMVGNEETCESSAVENFERKSCNSDGDFDDADRD 1226
>SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 1161
Score = 29.1 bits (62), Expect = 1.8
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +2
Query: 20 TDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNA 199
T +E Q++ F++ +Y +A+ Y +A+ + ++ + GQ + K
Sbjct: 180 TVDESGQANAYLGMGSVHFNQGKYEDAMNNYQQALSLFQKTG---DESGQANATMAKYED 236
Query: 200 CIKDCTHALELN------CDSAAAYKFRGRAYRLLGKFEEASHDLCESLKI 334
+ + H L L A AY G YR GK+E+A ++ +L +
Sbjct: 237 AMNNYQHVLSLFQKTGDVSGQAKAYHGMGNVYRSHGKYEDAMNNYQHALSL 287
>SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24)
Length = 338
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 212 CTHALELNCDSAAAYKFRGRAYRLLGKFEEASHDL 316
CT L N ++ YK+ G + +G F A DL
Sbjct: 204 CTKYLGQNLENVTTYKYLGLTFSSIGNFNAAKSDL 238
>SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 693
Score = 28.3 bits (60), Expect = 3.1
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Frame = +2
Query: 20 TDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILI------NPQSALFFAKRGQVYLK 181
T E Q+D ++S + S Y EAIK Y +A+ + + A G V
Sbjct: 85 TGNESKQADVRQSIGLVQQSLGNYEEAIKYYQQALQVYISTGNESKQAGVRLNIGAVQHS 144
Query: 182 LNKPNACIKDCTHALEL-----NCDSAAAYKFR-GRAYRLLGKFEEASHDLCESLKI 334
L +K C AL++ N A + G + LG +EEA ++L++
Sbjct: 145 LGNYEEAMKYCQQALQVYISTGNESKQAGVRLNIGGVQQRLGNYEEAMKYFQQALQV 201
>SB_1740| Best HMM Match : Protamine_P2 (HMM E-Value=0.9)
Length = 268
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 2 DSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAI 103
D + + +RD+SDE E M+A E + NE +
Sbjct: 98 DLPDDENEMDRDESDESEDEKMKAGKEEKENEEL 131
>SB_59121| Best HMM Match : TPR_1 (HMM E-Value=7.4e-10)
Length = 154
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 251 AYKFRGRAYRLLGKFEEASHDLCESLKIDYDDQTNEWLNEVKPNAEKLRQHKLSMQ 418
AY RG+ L +FEEA + +LK+ D+ T+ L + EKL+ L++Q
Sbjct: 2 AYIERGKVLEKLKRFEEAIENYTLTLKL--DEPTSFALLRIGSCYEKLKNDDLAVQ 55
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 74 FSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELN 235
FS +Y EA+ + I P+ AL + G+VY KL + + + + A++L+
Sbjct: 1514 FSIDKYQEALHELEDLKKIVPREALVYFLIGKVYKKLGQAHLAQMNFSWAIDLD 1567
>SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 14 EVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRG 166
E T E DQ+D + + + S Y EA+K Y +A+ + ++ AK G
Sbjct: 163 ERTGNESDQADVRNNIGVVQQSLGNYEEAMKYYQQALQVFERTGNESAKAG 213
>SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 974
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 296 EEASHDLCESLKIDYDDQTNEWLNEVKPNAEKLRQHKLSMQRKKED 433
E+ HD ES+ IDY+DQ ++ +E K + ++ + ++ K D
Sbjct: 20 EKLQHD-AESMIIDYEDQLSKKRSETKALVQTMQGLQDELEETKSD 64
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 38 QSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALF 151
+ D K +EA+ EH YN+ K Y + I P A F
Sbjct: 211 KEDNKLAEAITRSEEHAYNDEKKGYFDVIAKAPAKAHF 248
>SB_59790| Best HMM Match : VWA (HMM E-Value=0)
Length = 4151
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 288 VSSKKLRTISVNLSRLIMMIKPMNGLMR*SQTLRSYASISLVCNARRKTKSIA 446
VS + R V ++ + P+N M +Q +R+ S+ L+C RR +I+
Sbjct: 1532 VSPRYARVSVVVYAQTAKIAIPLNSRMSKAQIMRTIDSMKLICGYRRTGNAIS 1584
>SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 27.5 bits (58), Expect = 5.4
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 266 GRAYRLLGKFEEASHDLCESLKIDYDDQTNEWLN----EVKPNAEKLRQHKLSMQRKKED 433
GRAYRL E + L S+K + E ++ EV EKLRQ L +R +
Sbjct: 282 GRAYRLFDAGGELNEKLPPSIKNNLGPSAEEIIHSNEEEVAKREEKLRQ--LETKRTEVP 339
Query: 434 KEHRE 448
++ RE
Sbjct: 340 EDQRE 344
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +2
Query: 11 KEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNK 190
KE+ ++ ++ E+ +E +R F + Y +A +LY + + R ++ K +
Sbjct: 1270 KEMLHKKENELAEQ-AERIRVFESNNYGDAKELYETCNKLENEIGTLRESREELSKKYTQ 1328
Query: 191 PNACIKDCTHALE 229
A K+ TH +E
Sbjct: 1329 SVAKEKELTHLVE 1341
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 23 DEERDQSDEKRSEAMRAFSEHQYNEAIKL-YTEAILINPQSALF 151
DEE + +E+++E R F EH E + L +T++ L + +F
Sbjct: 112 DEEEIRDEEEKAEMRRNFEEHLIKEGLLLQHTDSDLNEEVNKVF 155
>SB_21748| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 373
Score = 27.1 bits (57), Expect = 7.2
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Frame = +2
Query: 14 EVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILI------NPQSALFFAKRGQVY 175
E T E DQ+ ++S + S Y EA+K Y +A+ + A G V
Sbjct: 243 ERTGNESDQAGVRQSIGVVQVSLGNYEEAMKYYQQALQVFERTGNESDQAGVRQSIGVVQ 302
Query: 176 LKLNKPNACIKDCTHALEL-----NCDSAAAYKFR-GRAYRLLGKFEEASHDLCESLKID 337
+ L +K AL++ N ++ A + G R LG +EEA ++L++
Sbjct: 303 VSLGNYEEAMKYYQQALQVFERTGNENNQAIVRHNIGVVQRRLGNYEEAMKYYQQALQV- 361
Query: 338 YDDQTNE 358
Y+ NE
Sbjct: 362 YERTGNE 368
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 53 RSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKD 211
+S A + E +Y E I +E + PQ R +LKL P ++D
Sbjct: 91 KSRAWKLVLEQRYEEGIAELSEMLRNFPQDLNSRCWRSDCFLKLGYPEIALRD 143
>SB_10260| Best HMM Match : B1 (HMM E-Value=7.6)
Length = 138
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 32 RDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILIN 133
+ Q +E S+A +A+SE +YN A KL L+N
Sbjct: 64 KSQRNEYFSKASKAYSEGKYNLAKKLSQTGHLLN 97
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 26.6 bits (56), Expect = 9.5
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 227 ELNCDSAAAYKFRGRAYRLLG-KFEEASHDLCESLKIDYDDQTNEWLNEVKPNAEKLRQH 403
+L+C+S++ + RL K +E D ES DD+ K +K +
Sbjct: 155 KLSCESSSCEESSDSEKRLKKEKNKEKQRDSSESSSDSEDDRKRRKKKVKKDKKQKAKDS 214
Query: 404 KLSMQRKKEDKEHRE 448
S+ ++D+E R+
Sbjct: 215 SESLSDSEDDRERRK 229
>SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1784
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +2
Query: 332 IDYD---DQTNEWLNEVKPNAEKLRQHKLSMQRKKEDKE 439
+DYD D N LNE+K +LR+ +S++ +D+E
Sbjct: 1680 VDYDNDDDDYNGTLNEIKEAVHELRKLIISLRTSIKDEE 1718
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +2
Query: 323 SLKIDYDDQTNEWLNEVKPNAEKLRQ----HKLSMQRKKEDKEHR 445
SLKI + T + N++ A+K+ + H ++++++K+D+EH+
Sbjct: 703 SLKIKKEKNTEQH-NKIASAADKVEEVNEYHSVNIKKEKKDREHK 746
>SB_51616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 308 HDLCESLKIDYDDQTNEWLNEVKPNAEKLRQHKLSMQRKKEDKE 439
H + + DY T EW + V+ + EK++ +L + KK KE
Sbjct: 16 HSVHSEMAFDYALATEEWKHVVEEHEEKIK--RLQEKYKKRCKE 57
>SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 26.6 bits (56), Expect = 9.5
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = +2
Query: 89 YNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRG 268
Y EA++LY + + Q + G+ + + K I AL L + +++G
Sbjct: 509 YKEALRLYQKTSDVQGQGEAHL-RIGKTHYQQGKYEEAIGHYKEALRLY-QKTSDDQWQG 566
Query: 269 RAYRLLG-------KFEEASHDLCESLKIDYDDQTNEW 361
+A+ L+G K+EEA E+L++ ++W
Sbjct: 567 KAHILIGNTHDQQGKYEEARGHYKEALRLYQKSSDDQW 604
>SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 14 EVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRG 166
E T E DQ+D +++ + Y EA+K Y +A+ ++ + F + G
Sbjct: 43 ESTGNESDQADVRQNIGVVQDRLGNYEEAMKYYQQALRVHISTGNEFKQAG 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,940,755
Number of Sequences: 59808
Number of extensions: 219012
Number of successful extensions: 888
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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