Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N07
         (330 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   3.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   4.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    20   5.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   7.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 209 VHFFTRLFLLCSYSV 165
           V F ++LFLLC  S+
Sbjct: 13  VWFLSKLFLLCPRSI 27


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 236 NNTCRTILTVHFFTRLFLLC 177
           ++T + IL V FF  L  LC
Sbjct: 246 SDTYQGILVVQFFCSLVALC 265


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 233 YFAGVDPARAR 265
           YFAGV+P + R
Sbjct: 118 YFAGVNPRKQR 128


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 74  RFVFLVSYHRFDH 36
           R+VF+ SY  FD+
Sbjct: 139 RYVFVTSYLLFDY 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,881
Number of Sequences: 336
Number of extensions: 919
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)