Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N07
         (330 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5252| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   8.5  
SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.)                 26   8.5  

>SB_5252| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 541

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 9/31 (29%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -2

Query: 119 FSLYIQYN-FIKNLPDRFVFLVSYHRFDHSL 30
           F+L+  Y+ ++ +L + F+++   +RF+H+L
Sbjct: 206 FALFANYSQYVSSLCNPFIYMARCNRFNHAL 236


>SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 965

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +2

Query: 2   LNLTWGDHIKENGQNGDSSLKIQNGLEGSL 91
           ++LTW   +KE+G+   +S KI+   +G++
Sbjct: 141 ISLTWSSPVKEDGELMTTSYKIELVAKGTI 170


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,758,553
Number of Sequences: 59808
Number of extensions: 96412
Number of successful extensions: 150
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 463065397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)