Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N07
         (330 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    22   1.7  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   5.1  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   5.1  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    21   5.1  

>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 21  IISKRMVKTVIAH*KYKTVWKVLYKIILNIQ 113
           IIS    KT+  +  YK   K LY  I+NI+
Sbjct: 314 IISSLSNKTIHNNNNYKNYNKKLYYNIINIE 344


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 93  YKEPSRPFC 67
           Y EPS PFC
Sbjct: 79  YLEPSPPFC 87


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 93  YKEPSRPFC 67
           Y EPS PFC
Sbjct: 80  YLEPSPPFC 88


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 272 EMRERERGQRPQNN 231
           +MRERER QR  ++
Sbjct: 71  QMREREREQREHSD 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,085
Number of Sequences: 438
Number of extensions: 922
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)