Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N06
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 25 0.83
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 25 0.84
U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 29 3.5
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 29 3.5
U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal mem... 28 4.6
AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical ... 28 6.1
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 25.0 bits (52), Expect(2) = 0.83
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 236 CATLKCSCGMNPSRTVIGLRSA-CPMEMRC 322
CAT++CS G ++ A CP C
Sbjct: 381 CATMRCSAGTTCQEALVKCAKAPCPSHAAC 410
Score = 24.2 bits (50), Expect(2) = 0.83
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 218 NVYHTKCATLKCSCG 262
N+ T C+T+KCS G
Sbjct: 335 NIQITPCSTMKCSAG 349
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 25.0 bits (52), Expect(2) = 0.84
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 236 CATLKCSCGMNPSRTVIGLRSA-CPMEMRC 322
CAT++CS G ++ A CP C
Sbjct: 316 CATMRCSAGTTCQEALVKCAKAPCPSHAAC 345
Score = 24.2 bits (50), Expect(2) = 0.84
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 218 NVYHTKCATLKCSCG 262
N+ T C+T+KCS G
Sbjct: 270 NIQITPCSTMKCSAG 284
>U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical
protein F18F11.4 protein.
Length = 550
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +1
Query: 1 VVIDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHMN--YPYWMTDEVYGLNKERQGEI 174
V D R LSED + + T ++ + +YYLH+ + + V N +
Sbjct: 385 VHFDMHSVYRNELSEDKTHQHTTIEIYDSLNLYYLHLRRFERHLLNPPVVKYNNRFNSSL 444
Query: 175 LMYANSQLLARL--RME 219
LM N+++L + RME
Sbjct: 445 LMKLNTKMLDQFTERME 461
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical protein
Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 7 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 180
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical protein
Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 7 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 180
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 7 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 180
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 7 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 180
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 1 protein.
Length = 665
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 325 VRQNNFVPVTSENLKLKMLLD-DVEQMIREGILTGKIERRDG 447
+R P TS ++K+K + D D+EQM+ LT +ER G
Sbjct: 525 LRDQVIYPDTSFDMKMKGMSDKDLEQMLENVQLTNILEREGG 566
>AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical
protein F37B4.7 protein.
Length = 424
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 7 IDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHM 111
++W++ + L +++ E VD ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,216,264
Number of Sequences: 27780
Number of extensions: 261993
Number of successful extensions: 715
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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