Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N05
(581 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 57 1e-08
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 46 3e-05
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 35 0.056
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 31 0.52
SB_20016| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_605| Best HMM Match : Calx-beta (HMM E-Value=0) 31 0.69
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 28 6.4
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 6.4
SB_3622| Best HMM Match : K167R (HMM E-Value=1.5) 28 6.4
SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3) 28 6.4
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 27 8.5
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 62.1 bits (144), Expect = 3e-10
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 7/197 (3%)
Frame = +3
Query: 9 YNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFG 188
++ ++ S RT F +S L L+++Y FDG DL W+ P + G
Sbjct: 487 FSQMVASKSNRTTFISSLLQLSDKYDFDGFDLDWEYPASR-------------------G 527
Query: 189 TTPVDDKESEHREGFTALVREM------KQALNVKPNMQLVISVLPNVNS-SIYFDVPSI 347
+P DK+ FT L EM K A KP M L +V + ++V +
Sbjct: 528 NSPPQDKQH-----FTILCEEMLDAFKRKAADTDKPRMLLTAAVSAGHGTVDAAYEVHKL 582
Query: 348 INLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLV 527
++D +N+ +D + P P +TA + P ++ A+ YW++ G P K+
Sbjct: 583 AGILDWINLMTYDLHGPWE-PYTGHHTALVGPPGDK---LTVSYAVKYWMEKGMPCGKIA 638
Query: 528 LGISTTGRTWKLDSDSE 578
LG++ G ++L ++
Sbjct: 639 LGMANYGHAFELSDPTK 655
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 56.8 bits (131), Expect = 1e-08
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 7/192 (3%)
Frame = +3
Query: 9 YNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFG 188
++ ++ + +R F +S++ + Q+ FDG DL W+ P + G
Sbjct: 218 FSRMVRTAASRKVFIDSSIAMLRQWNFDGFDLDWEYPGNR------------------VG 259
Query: 189 TTPVDDKESEHREGFTALVREMKQALNV------KPNMQLVISVLPN-VNSSIYFDVPSI 347
+ P D ++ FT L +E+ A + +P + L +V ++V I
Sbjct: 260 SDPGD------KQRFTILCQELLDAFKLEAAQTNRPRLLLTAAVAAGKATIDKAYEVDKI 313
Query: 348 INLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLV 527
++D++N+ A+D P+ +TA + P + A YWI GAP K+
Sbjct: 314 GQILDLINLMAYDL-RGMWEPETGHHTA-LEGPPGEE--LTVSFAAQYWIDKGAPASKIA 369
Query: 528 LGISTTGRTWKL 563
LG+ T GR +KL
Sbjct: 370 LGLGTYGRAFKL 381
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 45.6 bits (103), Expect = 3e-05
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 12/199 (6%)
Frame = +3
Query: 9 YNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFG 188
++ ++ + + R F SA+ GFDG+DL W+ P + +S G F +
Sbjct: 494 FSKMVATKEKRAIFIKSAIETLRTNGFDGLDLDWEYPGMRGGSPKSDKGRFTLLCQ---- 549
Query: 189 TTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNV-NSSIYFDVPSIINLVDI 365
E R+ F A ++ + K + L +V + +D+ I +D
Sbjct: 550 ---------ELRDAFEAEAKD-----SGKERLLLTAAVAAGLWTIKDAYDIEGISKPLDW 595
Query: 366 VNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYW-----------IQNGAP 512
+N+ +D + PK +TA P D L AI YW I+NG P
Sbjct: 596 INVMTYDLH-GTWEPKTGHHTA--MGPDG-DKL-TLPFAIWYWMNNRDTWEKPGIRNGMP 650
Query: 513 THKLVLGISTTGRTWKLDS 569
+K+VLG+ T GR + L+S
Sbjct: 651 ANKIVLGLGTYGRAFGLES 669
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 9 YNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSF 161
++ ++ + + R F SA+ +GFDG+DL W+ P + +S G F
Sbjct: 109 FSKMVATKEKRAIFIKSAIETLRTHGFDGLDLDWEYPGMRGGSPKSDKGRF 159
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 41.5 bits (93), Expect = 5e-04
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 7/189 (3%)
Frame = +3
Query: 18 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFGTTP 197
++ + R F + A+L + FDG+DL W+ P + G+ P
Sbjct: 109 MVSTASRRKIFIDDAILFLRNHMFDGLDLDWEYPGAR-------------------GSPP 149
Query: 198 VDDKESEHREGFTALVREMKQALNV------KPNMQLVISVLPNVNS-SIYFDVPSIINL 356
E +HR FT L +E+ A KP + L +V + +++ ++
Sbjct: 150 ----EDKHR--FTLLCQELLAAFETEAANTGKPRLLLTAAVSAGETTVKNGYEISALGQA 203
Query: 357 VDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGI 536
+D +N+ ++D + + + A + + DPL A++ WI G P++K+ LGI
Sbjct: 204 LDWINLMSYDLHGDWEDT--TGHHAAMDSSTG-DPL-TVTHAVDLWIAGGMPSNKIALGI 259
Query: 537 STTGRTWKL 563
GR++ L
Sbjct: 260 PLYGRSFTL 268
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 34.7 bits (76), Expect = 0.056
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3
Query: 9 YNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 119
++ ++++ R F +S + + +GFDG+DL W+ P
Sbjct: 106 FSRMVKTAATRKVFIDSVIRILRTWGFDGLDLDWEYP 142
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 198 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSI 347
+DDK++E +E FT V + + PN ++VI++L N + SI F V S+
Sbjct: 703 LDDKKNEPQETFTVTVSSADSNIEISPN-EVVITILDN-DVSIGFMVTSV 750
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 198 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSI 347
+DDKE E E FT + + +NVKP + + N ++SI F++ ++
Sbjct: 2157 IDDKEIEDLEAFTVTLSSDDKRVNVKPETG-TVKITDN-DASIGFELATV 2204
>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
Length = 561
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 18 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 119
++ + R F + A+L + FDG+DL W+ P
Sbjct: 33 MVSTASRRKIFIDDAILFLRNHMFDGLDLDWEYP 66
>SB_20016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 902
Score = 31.5 bits (68), Expect = 0.52
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = -2
Query: 319 LFTFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLS---STGVVP-NVFLMLCQKDP 152
++TFG + +C G+T C I++ + V PSL + + T VP + ++ C K
Sbjct: 290 IYTFGNETVCDCNPGYTGQRCTINK-QCVVPSLNTGEIGGKYETERVPGSKMVLFCNKG- 347
Query: 151 ILERIFFGFLFGNCQDRSIPSKPYCS 74
I + FG C D S S PY S
Sbjct: 348 ----ISLSWRFGVCVDGS--SSPYWS 367
>SB_605| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 1958
Score = 31.1 bits (67), Expect = 0.69
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 177 KTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSI 347
K F +DD E+ E F + + V P++ V V+ + ++ I FDVPSI
Sbjct: 950 KDFVIALIDDDVVENPEKFAVVFSTDDPRVTVDPSIPFVTVVITDNDAMIGFDVPSI 1006
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 195 PVDDKESEHREGFTALVREM 254
P DDK +E R FT+L++EM
Sbjct: 1066 PEDDKPAEQRMSFTSLLKEM 1085
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 171 IKKTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIY 329
+KK F + V EH+ GF + A + K +++LV S P + +SIY
Sbjct: 306 LKKPFKQSEVVKNTKEHQNGFPFVAATTSGAAHWKTSVELVNS--PALGTSIY 356
>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 628
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 494 DSKWCAYPQTCPWYQHHWTYVEA 562
D + C+YP T PW WT + +
Sbjct: 80 DERNCSYPTTGPWTTRPWTPISS 102
>SB_3622| Best HMM Match : K167R (HMM E-Value=1.5)
Length = 441
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 428 SVVRLFGVTFRCII--VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 255
SV F T + +I + C DV+ V + + V VNG QNA+ + + F + F
Sbjct: 252 SVENRFSGTNKALIDAIVCQDVEEVKSILETEAVNVNG-----QNAEGFVPLEFAVMLGF 306
Query: 254 HLTYKSGEAF 225
H K +AF
Sbjct: 307 HHIAKMLQAF 316
>SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3)
Length = 430
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 437 LRTAEPRSSTKRRRCYKLLD-SKWCAYPQTCPWYQHHWTYVEAR 565
LR + PRS ++ + K+ ++P P +HHWT E R
Sbjct: 26 LRNSTPRSKARKPLQFTSPSHGKFKSFPVKSPVRRHHWTLEEER 69
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 467 KRRRCYKLLDSKWCAYPQTCP 529
K RCY L DSK C P P
Sbjct: 327 KAPRCYNLCDSKTCIIPTKAP 347
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,880,364
Number of Sequences: 59808
Number of extensions: 345243
Number of successful extensions: 1097
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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