Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N04
         (372 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   0.58 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   7.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   7.1  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +2

Query: 50  TEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFK 169
           T  ++     +     S   YP+   +T V Q TEP+ ++
Sbjct: 468 TSSKRQRTSPQLSPMSSLPPYPNRTQITEVTQQTEPSIYQ 507


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = +2

Query: 149 TEPAAFKQYFSTWRDV 196
           T P  + + F+ W+D+
Sbjct: 435 TNPKQYMEIFARWKDI 450


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 101 AKNYPSWVHVTRVLQGT 151
           AK+Y  ++H+  V+Q T
Sbjct: 54  AKDYAKFIHIKAVVQIT 70


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 101 AKNYPSWVHVTRVLQGT 151
           AK+Y  ++H+  V+Q T
Sbjct: 54  AKDYAKFIHIKAVVQIT 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,376
Number of Sequences: 336
Number of extensions: 1738
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)