Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N04
(372 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 3e-13
SB_4901| Best HMM Match : Gelsolin (HMM E-Value=0.83) 34 0.032
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 33 0.074
SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.30
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 1.6
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 25 3.0
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 25 3.3
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 27 3.7
SB_42304| Best HMM Match : NHL (HMM E-Value=0) 27 4.9
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 27 4.9
SB_4985| Best HMM Match : NHL (HMM E-Value=4.7e-09) 27 4.9
SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5) 27 6.4
SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_22616| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 70.9 bits (166), Expect = 3e-13
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = +2
Query: 2 LDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFS 181
LD S ++VW+GK T+ EKS AM + K YP+W VTRV++G E FKQ+FS
Sbjct: 180 LDCGSSGVFVWVGKGCTKNEKSAAMKNGIDFIEKKGYPNWTQVTRVVEGGETPIFKQFFS 239
Query: 182 TWRD 193
W D
Sbjct: 240 GWTD 243
>SB_4901| Best HMM Match : Gelsolin (HMM E-Value=0.83)
Length = 60
Score = 34.3 bits (75), Expect = 0.032
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 26 YVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYF 178
YVW+G ++ E+ +AMT A L ++P ++ VT V +G E F F
Sbjct: 11 YVWVGAGASIDERGKAMTYAHNYLGQTDHP-FLPVTVVAEGKETNDFNSAF 60
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 33.1 bits (72), Expect = 0.074
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 5 DTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFST 184
D + +++ WIGK ST+ E A K + N H R +QG E FK YF +
Sbjct: 517 DELKYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQH--REVQGFESKLFKSYFKS 574
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 5 DTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRV 139
D + +++ WIGK ST+ E T A +T+ YP V V V
Sbjct: 906 DELKYDVHFWIGKDSTQDEYG---TAAYKTVELDIYPKSVKVEEV 947
>SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 31.1 bits (67), Expect = 0.30
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +2
Query: 14 SGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 193
S +I W S + +T + Q L++++ +W HVT + + STWR
Sbjct: 292 SHHISTWCHAVSRHVTSTHGVT-SHQYLASRHISTWRHVTSHQHLVSRSVTSYHISTWRH 350
Query: 194 VGMSHSRLV 220
V SH LV
Sbjct: 351 V-TSHQHLV 358
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 92 FAGLLSWLQTFPFQSTASR 36
FAG++SW TFPF SR
Sbjct: 141 FAGVVSWASTFPFDVIKSR 159
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 25.4 bits (53), Expect(2) = 3.0
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 86 QQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 193
Q +A P+W + R+ + E F++ F W D
Sbjct: 1665 QDNKTADTRPAWTLLARLHEKAETILFREKFLDWPD 1700
Score = 20.6 bits (41), Expect(2) = 3.0
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 23 IYVWIGKQSTEKEKSEAMTKAQQ 91
+YVW G+QS ++ +Q
Sbjct: 1617 LYVWNGQQSLSGQRKTVFALGKQ 1639
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 25.4 bits (53), Expect(2) = 3.3
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 86 QQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 193
Q +A P+W + R+ + E F++ F W D
Sbjct: 110 QDNKTADTRPAWTLLARLHEKAETILFREKFLDWPD 145
Score = 20.6 bits (41), Expect(2) = 3.3
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 23 IYVWIGKQSTEKEKSEAMTKAQQ 91
+YVW G+QS ++ +Q
Sbjct: 62 LYVWNGQQSLSGQRKTVFALGKQ 84
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 27.5 bits (58), Expect = 3.7
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 20 NIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVT-RVLQGTEPAAFKQYFST 184
+++ WIG+ ST+ E T A +T+ Y + V V R + E FK YF +
Sbjct: 568 DLHFWIGRGSTQDEYG---TAAYKTVELDTYLNDVPVQHREIMNHESDMFKTYFKS 620
>SB_42304| Best HMM Match : NHL (HMM E-Value=0)
Length = 1279
Score = 27.1 bits (57), Expect = 4.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 233 MVNDCHRHRIRIYLLSASVKLQF 301
+V DCH HR++++ + QF
Sbjct: 125 IVTDCHNHRVQVFNAQGAFMFQF 147
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/39 (25%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 20 NIYVWIGKQS--TEKEKSEAMTKAQQTLSAKNYPSWVHV 130
+IY+W+G+++ +E ++++ K ++ +S K WV +
Sbjct: 366 HIYMWVGEEAKKSEVDETQEFIKVREYVSGKVRVPWVKI 404
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 104 KNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 193
+N S+V +TR+ G E FK +F W D
Sbjct: 456 RNERSFV-ITRLRAGAETDDFKAFFGVWED 484
>SB_4985| Best HMM Match : NHL (HMM E-Value=4.7e-09)
Length = 124
Score = 27.1 bits (57), Expect = 4.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 233 MVNDCHRHRIRIYLLSASVKLQF 301
+V DCH HR++++ + QF
Sbjct: 77 IVTDCHNHRVQVFNAQGAFMFQF 99
>SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5)
Length = 237
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 5 DTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSA-KNYPSWVHVTRVLQGTEPAAFKQYF 178
D + N ++W+G S ++ K +A+ A ++L A ++Y + + VLQ + A K F
Sbjct: 68 DVLKDNDFIWLGSFSYDQMK-QAIGSAYKSLRANRSYKRFRRFSSVLQNEQLDACKCKF 125
>SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 5 DTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSA-KNYPSWVHVTRVLQGTEPAAFKQYF 178
D + N ++W+G S ++ K +A+ A ++L A ++Y + + VLQ + A K F
Sbjct: 68 DVLKDNDFIWLGSFSYDQMK-QAIGSAYKSLRANRSYKRFRRFSSVLQNEQLDACKCKF 125
>SB_22616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 139 YSGYVDPRWIIFS*QSLLGFCHGFRLFLFSRLLPDP 32
YS VDP + +F+ ++ + CH FR FS + P
Sbjct: 30 YSACVDPVFCMFTSRAQIQSCHRFRKVPFSSVPTAP 65
>SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 26 YVWIGKQSTEKEKSEAMTKAQQTLS 100
YV++GK ++ E+ AMT A Q L+
Sbjct: 65 YVYVGKAASIDERRNAMTYAHQPLT 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,174,059
Number of Sequences: 59808
Number of extensions: 228465
Number of successful extensions: 488
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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