Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N04
(372 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 64 4e-11
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 33 0.086
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 33 0.086
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 30 0.61
U61946-1|AAC24390.1| 575|Caenorhabditis elegans Hypothetical pr... 27 3.2
U41542-11|AAK39151.1| 67|Caenorhabditis elegans Hypothetical p... 27 4.3
AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical... 27 4.3
AC006629-11|ABC48256.1| 312|Caenorhabditis elegans Hypothetical... 27 4.3
U00052-7|AAK21422.2| 232|Caenorhabditis elegans Fatty acid/reti... 27 5.7
AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical ... 27 5.7
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 26 7.5
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 26 7.5
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 63.7 bits (148), Expect = 4e-11
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +2
Query: 2 LDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFS 181
LD ++G I+VWIG + T +E+S+A+ Q L + P W VTRVL+ E F Q+F
Sbjct: 287 LDAINGGIFVWIGHECTLEERSKALIWGQNYLKQHHLPRWTQVTRVLESAESTQFTQWFR 346
Query: 182 TWRD 193
W D
Sbjct: 347 DWVD 350
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 2 LDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYP--SWVHVTRVLQGTEPAAFKQY 175
LD ++ +IYVW+G + EK EA+ A+ L P + + QG EP FK++
Sbjct: 392 LDALN-SIYVWVGANANANEKKEALNTAKLYLEKDKLPRHKKTAIDTIFQGKEPPTFKKF 450
Query: 176 FSTWRD 193
F +W D
Sbjct: 451 FPSWDD 456
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 32.7 bits (71), Expect = 0.086
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 14 SGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 193
+ +I++WIGK++ K + + P + V R +G E F+ F+ W +
Sbjct: 781 NSDIFLWIGKKANRLLKMAGQKLVVELHQMIDRPDYAQVYRETEGEESMMFRSKFAGWDE 840
Query: 194 V 196
+
Sbjct: 841 I 841
Score = 25.8 bits (54), Expect = 9.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 17 GNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAF 166
G +YVW+GK S +E A A L ++ + + V +G E F
Sbjct: 1084 GVVYVWMGKDSDPREHEFARQVASD-LVVRDDDNDFRIVEVQEGEENEEF 1132
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 32.7 bits (71), Expect = 0.086
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 14 SGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 193
+ +I++WIGK++ K + + P + V R +G E F+ F+ W +
Sbjct: 781 NSDIFLWIGKKANRLLKMAGQKLVVELHQMIDRPDYAQVYRETEGEESMMFRSKFAGWDE 840
Query: 194 V 196
+
Sbjct: 841 I 841
Score = 25.8 bits (54), Expect = 9.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 17 GNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAF 166
G +YVW+GK S +E A A L ++ + + V +G E F
Sbjct: 1084 GVVYVWMGKDSDPREHEFARQVASD-LVVRDDDNDFRIVEVQEGEENEEF 1132
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 29.9 bits (64), Expect = 0.61
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 26 YVWIGKQSTEKEKSEA-MTKAQQTLSAKNYPSWVHVTRVLQ 145
Y + GK T KE M K + K+YP WV T V+Q
Sbjct: 643 YHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQ 683
>U61946-1|AAC24390.1| 575|Caenorhabditis elegans Hypothetical
protein F47C12.4 protein.
Length = 575
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 249 WQSLTIYCF*TSLECDMPTSLQVEKYCLKAAG 154
W + YCF S D+ T + EKYC + AG
Sbjct: 111 WIQMYGYCFKMSEMHDVYTHEEAEKYCKEQAG 142
>U41542-11|AAK39151.1| 67|Caenorhabditis elegans Hypothetical
protein C07A12.2 protein.
Length = 67
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 50 TEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTW 187
TE + MT+ Q+ + P + + Q P A QYF+ W
Sbjct: 22 TEARNAPPMTRIQEVFRSLMAPEEIRGKKYYQQYVPNAENQYFTEW 67
>AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical
protein W10G11.14 protein.
Length = 210
Score = 27.1 bits (57), Expect = 4.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 29 VWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQY 175
VWIG Q T+K + +T A L+A Y + + GT+ F++Y
Sbjct: 107 VWIGIQRTQKCLKQKLTAACSALTAFEY-----TDKSVTGTDGFVFQKY 150
>AC006629-11|ABC48256.1| 312|Caenorhabditis elegans Hypothetical
protein F12E12.7 protein.
Length = 312
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 337 FIFNIITYLSYIEL*FDTGG*QIYANPMTVAI 242
F+ + ++ SY E+ F+TGG + A P+T I
Sbjct: 134 FLESYLSEFSYREVVFETGGITVSAEPLTFLI 165
>U00052-7|AAK21422.2| 232|Caenorhabditis elegans Fatty acid/retinol
binding proteinprotein 8 protein.
Length = 232
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 108 IIHLGST*PEYCRALSRLPSNNTSRPGGTWACHIPDWSRSS 230
+ LG EYC L + S WACHI + ++S+
Sbjct: 121 VAKLGPKGQEYCNGLEAQMYTDASPDRVVWACHIFNNAKSA 161
>AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical
protein Y106G6A.2a protein.
Length = 428
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 53 EKEKSEAMTKAQQTLSAKNYPSWVHVTRV 139
+KEKSE +TK ++ ++ K +H R+
Sbjct: 200 KKEKSERLTKLEEEVAKKRLKYCIHACRI 228
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 26.2 bits (55), Expect = 7.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 168 NNTSRPGGTWACHIPDWSRSSKWLMIATVIGFAYICY 278
N T+ G + +P + W I ++G AY+CY
Sbjct: 97 NVTNAIQGMFIVGLPIAVKVGGWWSIGAMVGVAYVCY 133
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 26.2 bits (55), Expect = 7.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 168 NNTSRPGGTWACHIPDWSRSSKWLMIATVIGFAYICY 278
N T+ G + +P + W I ++G AY+CY
Sbjct: 97 NVTNAIQGMFIVGLPIAVKVGGWWSIGAMVGVAYVCY 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,311,809
Number of Sequences: 27780
Number of extensions: 162534
Number of successful extensions: 338
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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