BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N03
(584 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 34 8e-04
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 29 0.022
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 26 0.20
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 26 0.20
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 26 0.20
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 3.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 3.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 3.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 3.3
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 4.4
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 22 4.4
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 21 5.8
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 7.7
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 34.3 bits (75), Expect = 8e-04
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 394 TALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGV*INDVVVE 534
TA+RDP FY+ + I +K L Y + +L++ G+ ++++ V+
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITVSNIEVQ 438
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 16 YSPIKTGYYPLMTSYYFPFAQRPDN 90
Y IK YP S +PF + P N
Sbjct: 626 YCGIKDKLYPDRRSMGYPFDRMPRN 650
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 29.5 bits (63), Expect = 0.022
Identities = 33/183 (18%), Positives = 70/183 (38%), Gaps = 8/183 (4%)
Frame = +1
Query: 10 SWYSPIKTGYYPLMTSYYF-------PFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSL 168
+W P+ Y+P + S P Q P + N + ++ +D + ++
Sbjct: 260 NWREPLPEAYFPKLDSLVASRTWPARPVNQVPRDLNREVDQIRLSLDDMDRWRDRIYDAI 319
Query: 169 QKGKFES-YGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLGAAPK 345
G G+ I + + I+ +GN + + ++Y + + ++G
Sbjct: 320 HSGVVRGDNGQNIPLTEFEGIDVLGNIIESSI----LSPNRNYYGDFHNMGHILIGYIHD 375
Query: 346 PFDKHTFMPSALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGV*INDV 525
P + + LRDP F++ + I FK L Y +L++ GV + ++
Sbjct: 376 PDHRFLEPFGVMADPAVDLRDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNYPGVTVTNI 435
Query: 526 VVE 534
V+
Sbjct: 436 EVQ 438
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 26.2 bits (55), Expect = 0.20
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 410 LHSISYXTGLWVTLTHSSIT 469
+H+ SY TG+WV L + S T
Sbjct: 123 IHTSSYMTGIWVWLINISAT 142
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/45 (24%), Positives = 17/45 (37%)
Frame = +2
Query: 317 LAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHSISYXTGLWVTL 451
+AMC + + + + S P L F P L W+ L
Sbjct: 178 IAMCGMYYRDECSFAESIPPYLFFVPPPLMFLQDFLSHQHAWIWL 222
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 26.2 bits (55), Expect = 0.20
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 410 LHSISYXTGLWVTLTHSSIT 469
+H+ SY TG+WV L + S T
Sbjct: 356 IHTSSYMTGIWVWLINISAT 375
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/45 (24%), Positives = 17/45 (37%)
Frame = +2
Query: 317 LAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHSISYXTGLWVTL 451
+AMC + + + + S P L F P L W+ L
Sbjct: 411 IAMCGMYYRDECSFAESIPPYLFFVPPPLMFLQDFLSHQHAWIWL 455
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 26.2 bits (55), Expect = 0.20
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 410 LHSISYXTGLWVTLTHSSIT 469
+H+ SY TG+WV L + S T
Sbjct: 356 IHTSSYMTGIWVWLINISAT 375
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/45 (24%), Positives = 17/45 (37%)
Frame = +2
Query: 317 LAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHSISYXTGLWVTL 451
+AMC + + + + S P L F P L W+ L
Sbjct: 411 IAMCGMYYRDECSFAESIPPYLFFVPPPLMFLQDFLSHQHAWIWL 455
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 454 AFKHYLKPYPQEKLHFVGV 510
AF H+L + E LH VG+
Sbjct: 163 AFSHFLIVFFTETLHTVGI 181
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 454 AFKHYLKPYPQEKLHFVGV 510
AF H+L + E LH VG+
Sbjct: 163 AFSHFLIVFFTETLHTVGI 181
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 454 AFKHYLKPYPQEKLHFVGV 510
AF H+L + E LH VG+
Sbjct: 163 AFSHFLIVFFTETLHTVGI 181
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 454 AFKHYLKPYPQEKLHFVGV 510
AF H+L + E LH VG+
Sbjct: 163 AFSHFLIVFFTETLHTVGI 181
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.8 bits (44), Expect = 4.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 354 VEWFRCCTEHMASDNFIRSLIILCNFFFIQIGVL 253
++W R +AS FI I LC+ + IG +
Sbjct: 275 IKWTRIAYMALASVPFIFDSIHLCDVCYSTIGTV 308
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 21.8 bits (44), Expect = 4.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 354 VEWFRCCTEHMASDNFIRSLIILCNFFFIQIGVL 253
++W R +AS FI I LC+ + IG +
Sbjct: 293 IKWTRIAYMALASVPFIFDSIHLCDVCYSTIGTV 326
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 294 IILCNFFFIQIGVLLPIVSDKVNCLFIV 211
I C FF I +LL I + LFI+
Sbjct: 407 ITACKFFSIDNALLLSICGASSSYLFIM 434
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 13 WYSPIKTGYYPLMTSY 60
W+SP Y+P SY
Sbjct: 71 WHSPRFHAYFPTANSY 86
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,130
Number of Sequences: 336
Number of extensions: 2967
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -