Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N02
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.0  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.3  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 99  AHANTSERNAGAAPPGNGTCAISP 28
           A+   S ++A + PPGN    ++P
Sbjct: 218 ANVKLSPKSASSLPPGNNIHGMAP 241


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 99  AHANTSERNAGAAPPGNGTCAISP 28
           A+   S ++A + PPGN    ++P
Sbjct: 166 ANVKLSPKSASSLPPGNNIHGMAP 189


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 99  AHANTSERNAGAAPPGNGTCAISP 28
           A+   S ++A + PPGN    ++P
Sbjct: 349 ANVKLSPKSASSLPPGNNIHGMAP 372


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 17/74 (22%), Positives = 26/74 (35%)
 Frame = +2

Query: 44  VPFPGGAAPAFLSDVFACACAAPXXXXXXXWAKIGINFSNFPFTPYALVFHLSLGGCLGL 223
           +P P   AP  ++    C  AA        W +    F+  P +   L+   S      L
Sbjct: 183 LPLPPIFAPTMINPSAICESAAQLLFMNVQWVRSIPAFTCLPLSDQLLLLEESWLDLFVL 242

Query: 224 YAMLWLELTMFDAI 265
            A  +L L  F  +
Sbjct: 243 GAAQFLPLMDFSVL 256


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -2

Query: 246  NSSHSIAYSPRQPPRERW 193
            N  HS+    + P RE W
Sbjct: 1007 NDQHSLVVYWKPPAREEW 1024


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 5   EAAPGPDPGDIAHVP 49
           ++ P P+P D A  P
Sbjct: 133 QSQPNPEPADFADAP 147


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 5   EAAPGPDPGDIAHVP 49
           ++ P P+P D A  P
Sbjct: 133 QSQPNPEPADFADAP 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,258
Number of Sequences: 336
Number of extensions: 1897
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)