Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N02
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88174-4|AAB42275.1| 280|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z50796-5|CAD45597.1| 259|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z50796-4|CAA90670.1| 258|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF179359-1|AAF13869.1| 259|Caenorhabditis elegans cyclin-depend... 28 5.0
AF106575-17|AAD56300.2| 333|Caenorhabditis elegans Serpentine r... 28 5.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 6.7
AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical... 27 6.7
AC006720-4|AAF60448.1| 330|Caenorhabditis elegans Hypothetical ... 27 8.8
>U88174-4|AAB42275.1| 280|Caenorhabditis elegans Hypothetical
protein M01A10.3 protein.
Length = 280
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Frame = +2
Query: 32 DIAHV-PFPGGAAPAFLSDVFACACAAPXXXXXXXWAKIGINFSNFPFTPYALVFHLSLG 208
+I+H+ P A +SD+F C +P W+++GINF N P +P+ +FH+ L
Sbjct: 173 EISHIFRQPEKRPSALISDLFTIICLSPLLILVVLWSQVGINFQNAPASPWVPIFHVGLI 232
Query: 209 GCLGLYAMLWLELTMFDAIRYLLPLAALTFLSGHRLLRRLVQDKTQS 349
G G+Y M W++ MF ++YL L LTF++G+R+LR + + K +S
Sbjct: 233 GIFGIYFMFWVQFDMFVTLKYLAVLGFLTFVAGNRVLRAISESKQKS 279
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 8 AAPGPDPGDIAHVPFPGGAAPAFLSDVFACACAAPXXXXXXXWAKIGINFSNFPF 172
A P P P ++A P P AAP + ++ AAP AK + FS F
Sbjct: 526 AEPAPVP-EVAPAPAPAPAAPESDASGYSSGAAAPAGGGGSYPAKKMMRFSRLVF 579
>Z50796-5|CAD45597.1| 259|Caenorhabditis elegans Hypothetical
protein T05A6.2b protein.
Length = 259
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = -2
Query: 336 SCTSRRSSRCPDRNVSAASGSRYRIASNIVNSSHS------IAYSPRQPPRERWKT 187
SC +R S+ N A +ASN+ S+ S + SPR PP ++ T
Sbjct: 190 SCKEKRGSKIVHNNKGAPKRPLRFVASNVPKSAQSSTSDTVLVSSPRSPPAKKMTT 245
>Z50796-4|CAA90670.1| 258|Caenorhabditis elegans Hypothetical
protein T05A6.2a protein.
Length = 258
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = -2
Query: 336 SCTSRRSSRCPDRNVSAASGSRYRIASNIVNSSHS------IAYSPRQPPRERWKT 187
SC +R S+ N A +ASN+ S+ S + SPR PP ++ T
Sbjct: 189 SCKEKRGSKIVHNNKGAPKRPLRFVASNVPKSAQSSTSDTVLVSSPRSPPAKKMTT 244
>AF179359-1|AAF13869.1| 259|Caenorhabditis elegans cyclin-dependent
kinase inhibitor protein.
Length = 259
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = -2
Query: 336 SCTSRRSSRCPDRNVSAASGSRYRIASNIVNSSHS------IAYSPRQPPRERWKT 187
SC +R S+ N A +ASN+ S+ S + SPR PP ++ T
Sbjct: 190 SCKEKRGSKIVHNNKGAPKRPLRFVASNVPKSAQSSTSDTVLVSSPRSPPAKKMTT 245
>AF106575-17|AAD56300.2| 333|Caenorhabditis elegans Serpentine
receptor, class h protein5 protein.
Length = 333
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 149 INFSNFPFTPYALVFHLSLGGCLGLYAMLWLELTMFDAIRYLLPLAALTFLS 304
+ S FP+ PY L+ + G M + IR +LP+ L +S
Sbjct: 271 VELSQFPYIPYILLMIIQEHGAASTVTMFLTNNLLRQTIRKMLPVRQLEAVS 322
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 411 TGLSFNISLSQIQYVFTLLNSTINVT*FKRNE*NRKLYV*LSY 539
T SFNI +S++QY+ + + T+ +N +R L V SY
Sbjct: 1538 TSFSFNIPVSEVQYILLIESGTMIKLHSTQNIVSRGLVVTASY 1580
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 411 TGLSFNISLSQIQYVFTLLNSTINVT*FKRNE*NRKLYV*LSY 539
T SFNI +S++QY+ + + T+ +N +R L V SY
Sbjct: 1538 TSFSFNIPVSEVQYILLIESGTMIKLHSTQNIVSRGLVVTASY 1580
>AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical
protein Y116A8C.26a protein.
Length = 917
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 136 GEDRHQLLQLPLHTVRSRLPSLS 204
GED QL+QLPLH + + +LS
Sbjct: 366 GEDGDQLVQLPLHVILTNSIALS 388
>AC006720-4|AAF60448.1| 330|Caenorhabditis elegans Hypothetical
protein Y17G9B.7 protein.
Length = 330
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 201 ERWKTRAYGVKGKLEKLMPIFAQ 133
ERW+T +GV+ L LM IF Q
Sbjct: 102 ERWETPFFGVRQFLNHLMEIFHQ 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,490,443
Number of Sequences: 27780
Number of extensions: 192864
Number of successful extensions: 623
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -