Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N02
         (547 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.38 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       25   0.66 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   2.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.5  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   6.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.2  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 2   REAAPGPDPGDIAHVPFPGG 61
           R A+P P  G + H P P G
Sbjct: 111 RSASPSPGMGHMGHTPTPNG 130


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 12/38 (31%), Positives = 14/38 (36%)
 Frame = -2

Query: 306 PDRNVSAASGSRYRIASNIVNSSHSIAYSPRQPPRERW 193
           P R +S   G   R +          AYS  Q P E W
Sbjct: 593 PGRGISKFGGEDVRESEAFAEEYTEEAYSVAQEPEEEW 630


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 270 YRIASNIVNSSHSIAYSPRQPPRERWK 190
           YRI+  I+ +   I  SPR P +  +K
Sbjct: 12  YRISPQILKNDKRIYLSPRTPIKNVYK 38


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 140 KIGINFSNFPFTP 178
           +I +NF++FP TP
Sbjct: 193 EISVNFAHFPATP 205


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 251 LSTPATASRTARGSLPERDGRRE 183
           L+TP T +  + GS  + DG+ +
Sbjct: 9   LATPRTGTNCSSGSSSDSDGQTD 31


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = -2

Query: 318 SSRCPDRNVSAASGSRYRIASNIVNSSHSIAYSPRQPPRERWKTRA 181
           SS C     +A SGSR+ I      S      S  +  R+  KT A
Sbjct: 577 SSTCKKDKKNAGSGSRFTIYKANKASKKKREKSSAKKERKATKTLA 622


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 237  HSIAYSPRQPPRERWKTRAYG 175
            H++  + + PPRE W     G
Sbjct: 991  HTLKVTWKPPPREDWNGEILG 1011


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,308
Number of Sequences: 438
Number of extensions: 2318
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)