Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N01
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    25   2.0  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   2.0  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   3.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   4.5  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   7.9  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   7.9  

>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 622 GKCPMAGQTLRGVDLLDEERDHRGP 548
           G+  M+G+  RGVD+L EE  H  P
Sbjct: 170 GRVAMSGEG-RGVDILPEEDSHPEP 193


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 137 WRPVSDRPRGSCISQGNTVRLNVDIR 60
           W PV +  R  CI+    +RL  D++
Sbjct: 313 WAPVIEELRNECIAARERMRLTTDLQ 338


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 137 WRPVSDRPRGSCISQGNTVRLNVDIR 60
           W P  +R RG C++    +RL  D++
Sbjct: 305 WSPELERLRGICLAARERLRLITDLQ 330


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 184 GVAAPAQGTHHQSHH 228
           G AA A G HH  HH
Sbjct: 714 GGAAAATGHHHHQHH 728


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 184 GVAAPAQGTHHQSHHTIF 237
           G AAP+ G  HQS+HT +
Sbjct: 191 GQAAPSTGL-HQSNHTFY 207


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 184 GVAAPAQGTHHQSHHTIF 237
           G AAP+ G  HQS+HT +
Sbjct: 191 GQAAPSTGL-HQSNHTFY 207


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,369
Number of Sequences: 2352
Number of extensions: 11835
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)