Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N01
         (624 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g62290.1 68414.m07027 aspartyl protease family protein contai...    38   0.007
At5g01800.1 68418.m00099 saposin B domain-containing protein con...    36   0.017
At4g04460.1 68417.m00648 aspartyl protease family protein contai...    35   0.050
At1g11910.1 68414.m01374 aspartyl protease family protein contai...    35   0.050
At3g51730.1 68416.m05672 saposin B domain-containing protein con...    31   0.82 
At5g08110.1 68418.m00946 DEAD/DEAH box helicase, putative severa...    30   1.4  
At3g13840.1 68416.m01747 scarecrow transcription factor family p...    29   3.3  
At5g46875.1 68418.m05776 hypothetical protein                          28   4.4  
At1g30100.1 68414.m03679 9-cis-epoxycarotenoid dioxygenase, puta...    27   7.7  

>At1g62290.1 68414.m07027 aspartyl protease family protein contains
           Pfam profiles: PF00026 eukaryotic aspartyl protease,
           PF03489 surfactant protein B, PF05184 saposin-like type
           B, region 1
          Length = 513

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +2

Query: 44  TGEFKDECLHLAEQYYPVIYNFLVADLKPAAICKMIGICAGNAT 175
           +G    +C  + +QY   I + L+A+ +P  IC  IG+CA + T
Sbjct: 317 SGVVSQQCKTVVDQYGQTILDLLLAETQPKKICSQIGLCAYDGT 360



 Score = 37.1 bits (82), Expect = 0.009
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +2

Query: 467 VTAAVNAACGVLPASVNAECKEFVDQYGPAVIALLVQEIDPSK 595
           V A +N A G     V+ +CK  VDQYG  ++ LL+ E  P K
Sbjct: 306 VVAMINKAIGA-SGVVSQQCKTVVDQYGQTILDLLLAETQPKK 347


>At5g01800.1 68418.m00099 saposin B domain-containing protein
           contains Pfam profiles: PF00026 eukaryotic aspartyl
           protease, PF03489 surfactant protein B, PF05184
           saposin-like type B, region 1
          Length = 217

 Score = 36.3 bits (80), Expect = 0.017
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = +2

Query: 2   ELEFYKVLQGLCKQTGEFKDECLHLAEQYYPVIYNFLVADLKPAAICKMIGICAGNAT 175
           +L+  ++L   CK    ++D+C  +  +Y P++   L   L+   +C ++ +C G AT
Sbjct: 146 KLKIIRLLLKECKSLNNYQDKCKKMVFEYGPLMLTDLQKFLEKKDVCTILHVCPGPAT 203



 Score = 31.1 bits (67), Expect = 0.62
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +2

Query: 8   EFYKVLQGLCKQTGEFKDECLHLAEQYYPVIYNFLVADLKPAAICKMIGIC 160
           E  + L   C Q    K +CL + + Y  + +   V+ +K   ICK + +C
Sbjct: 61  ELVEALHISCSQIPPLKKQCLSMVDHYTQLFFT-QVSTIKSDQICKRLNLC 110


>At4g04460.1 68417.m00648 aspartyl protease family protein contains
           Pfam profiles: PF00026 eukaryotic aspartyl protease,
           PF03489 surfactant protein B, PF05184 saposin-like type
           B, region 1
          Length = 508

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 62  ECLHLAEQYYPVIYNFLVADLKPAAICKMIGICAGNAT 175
           EC  + +QY   + N L+A   P  +C  IG+CA + T
Sbjct: 321 ECKAVVDQYGKTMLNSLLAQEDPKKVCSQIGVCAYDGT 358



 Score = 33.1 bits (72), Expect = 0.15
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 467 VTAAVNAACGVLPASVNAECKEFVDQYGPAVIALLVQEIDPSK 595
           V   +N A G     V+ ECK  VDQYG  ++  L+ + DP K
Sbjct: 304 VITMINHAIGA-QGIVSRECKAVVDQYGKTMLNSLLAQEDPKK 345


>At1g11910.1 68414.m01374 aspartyl protease family protein contains
           Pfam profiles: PF00026 eukaryotic aspartyl protease,
           PF03489 surfactant protein B, PF05184 saposin-like type
           B, region 1
          Length = 506

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 467 VTAAVNAACGVLPASVNAECKEFVDQYGPAVIALLVQEIDPSK 595
           +   +N A G     V+ +CK  VDQYG  ++ LL+ E  P K
Sbjct: 299 IITMINHAIGAAGV-VSQQCKTVVDQYGQTILDLLLSETQPKK 340



 Score = 34.3 bits (75), Expect = 0.067
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +2

Query: 47  GEFKDECLHLAEQYYPVIYNFLVADLKPAAICKMIGICAGNAT 175
           G    +C  + +QY   I + L+++ +P  IC  IG+C  + T
Sbjct: 311 GVVSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGT 353


>At3g51730.1 68416.m05672 saposin B domain-containing protein
           contains Pfam profiles: PF00026 eukaryotic aspartyl
           protease, PF03489 surfactant protein B, PF05184
           saposin-like type B, region 1
          Length = 213

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 12/53 (22%), Positives = 24/53 (45%)
 Frame = +2

Query: 2   ELEFYKVLQGLCKQTGEFKDECLHLAEQYYPVIYNFLVADLKPAAICKMIGIC 160
           + E  + L   C Q   +  +C+ L + Y P+ +   +   +P   CK + +C
Sbjct: 60  QAEIIEDLHDRCSQLRGYSQQCISLVDYYVPLFF-LQLESFQPHYFCKRMNLC 111


>At5g08110.1 68418.m00946 DEAD/DEAH box helicase, putative several
           putative ATP-dependent helicases
          Length = 1058

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -3

Query: 481 HG--CSNFCLDSRVAEFNLQVVQEVLAERADHLV 386
           HG  C  FC   ++ E  L + +E+LAE A HLV
Sbjct: 570 HGLRCIAFCPSRKLCELVLCLTREILAETAPHLV 603


>At3g13840.1 68416.m01747 scarecrow transcription factor family
           protein
          Length = 510

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 383 QNKVVCSFCQYFLHYLQVELSDSRVEAKVTAAVNAACGVLPASVNAECKEFVD 541
           +N +VC+  Q+ LH+L+  ++D R E           GV+    N EC    D
Sbjct: 345 ENLIVCA--QFRLHHLKHSINDERGETLKAVRSLRPKGVVLCENNGECSSSAD 395


>At5g46875.1 68418.m05776 hypothetical protein
          Length = 132

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 262 GFLSSDQFGRWCDGFD 215
           G +  D  GRWCDGFD
Sbjct: 60  GGVLQDSKGRWCDGFD 75


>At1g30100.1 68414.m03679 9-cis-epoxycarotenoid dioxygenase,
           putative / neoxanthin cleavage enzyme, putative /
           carotenoid cleavage dioxygenase, putative similar to
           9-cis-epoxycarotenoid dioxygenase GI:6715257 from
           [Phaseolus vulgaris]
          Length = 589

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 288 RSKRMSA*SVKRNPNRESYPHYPS 359
           R +++SA SV   PN  ++P+YPS
Sbjct: 40  RRRKLSANSVSDTPNLLNFPNYPS 63


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,383,792
Number of Sequences: 28952
Number of extensions: 239637
Number of successful extensions: 696
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)