Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M20
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   4.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   4.4  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   5.8  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 35  KDEPQTVPSAASTPPLSPIDMDS 103
           K  PQ  PS +STP   P    S
Sbjct: 68  KKSPQGAPSPSSTPSSLPTQRTS 90


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/53 (22%), Positives = 25/53 (47%)
 Frame = +2

Query: 56  PSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKI 214
           P  AS    +     S + ++LER+  R++      R +  + ++  E ++KI
Sbjct: 79  PKGASNGKRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKI 131


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/53 (22%), Positives = 25/53 (47%)
 Frame = +2

Query: 56  PSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKI 214
           P  AS    +     S + ++LER+  R++      R +  + ++  E ++KI
Sbjct: 99  PKGASNGKRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKI 151


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 454 TKIYNYILHSKIKITNRFVCCVLAG 380
           TK YN ++H +     R   C + G
Sbjct: 90  TKSYNLLIHERTHTDERPYSCDICG 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,824
Number of Sequences: 336
Number of extensions: 2636
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)