Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M20
(589 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyc... 48 1e-06
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 46 4e-06
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 46 5e-06
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 45 9e-06
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 30 0.22
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.38
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 29 0.38
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 28 0.88
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 1.2
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 1.5
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 2.0
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 27 2.7
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha... 26 3.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 3.5
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 26 3.5
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 4.7
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 26 4.7
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 26 4.7
SPAPB1A10.03 |nxt1||mRNA export receptor Nxt1|Schizosaccharomyce... 26 4.7
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 26 4.7
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 26 4.7
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 4.7
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 8.2
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 8.2
>SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 209
Score = 48.0 bits (109), Expect = 1e-06
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +2
Query: 2 ADLDRYPTPMVKDEPQTVPSAASTPPLSPIDMDSQERI-KLERKRQ-----RNRVAASKC 163
+D D P + A+ P +D E KL +Q RNR AA KC
Sbjct: 79 SDFDELSEYTASKSPSIISEASHNSPSRELDDSGDENTSKLTGTKQSMLKARNRQAAQKC 138
Query: 164 RRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEH 301
R +K + + L+D+V EN EL Q L++ + +L+ V H
Sbjct: 139 RIKKKKYLQTLQDQVNYYTSENKELLQSANDLREEIIKLRTLVFAH 184
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 46.0 bits (104), Expect = 4e-06
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +2
Query: 116 KLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVL 295
K R +RNR+AASK R++K E I +LE ++ L ++ +L+ RLK Q+L
Sbjct: 12 KRRRILERNRIAASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLSQLQQEAFRLKSQLL 71
Query: 296 EHANGGCHIE 325
H C ++
Sbjct: 72 AHQGCQCSVK 81
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 45.6 bits (103), Expect = 5e-06
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 113 IKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQV 292
+K R +RNR+AASKCR++K LE I ++ L +V +L++ V LK Q+
Sbjct: 268 MKRRRFLERNRIAASKCRQKKKLWTQNLEKTAHIACEQSKALRILVSQLREEVICLKNQL 327
Query: 293 LEHANGGC 316
L H + C
Sbjct: 328 LAHQDCNC 335
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 44.8 bits (101), Expect = 9e-06
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 134 QRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEH 301
+RNR AA KCR+RK + +S L+ KV+ EN L+ V L++ + LK ++ H
Sbjct: 480 ERNRQAALKCRQRKKQWLSNLQAKVEFYGNENEILSAQVSALREEIVSLKTLLIAH 535
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 30.3 bits (65), Expect = 0.22
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +2
Query: 125 RKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEHA 304
+++ +NR A R+RK + + LE +V LK ++ +L+ V +L+E++
Sbjct: 81 KRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRILK 140
Query: 305 NGGCHIESHF*SRCRRLSS 361
+G E R LSS
Sbjct: 141 DGSFTFEMSLPHRNPSLSS 159
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.38
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 170 RKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEHANGG 313
R L ++ K E+ V++L E+AEL ++++ HRLK + E GG
Sbjct: 208 RYLIQVGKDEEAVRVLS-ESAELFPDSEEVQNEYHRLKSSIDEEFAGG 254
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 29.5 bits (63), Expect = 0.38
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 92 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVK 211
D DS + +L++K+QR+ ASK +LER +L +K++
Sbjct: 166 DRDSFQS-RLKQKKQRSEFRASKREMERLERDQELRNKIE 204
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 28.3 bits (60), Expect = 0.88
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 14 RYPTPMVKDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISK 193
R P+P + S S P ++ D + R++ K Q N + RR+K+E + K
Sbjct: 265 RSPSPDFRTRNHQFHSRDSQP-ITQRHTDIESRLQ---KMQDNAKELDESRRKKIELLEK 320
Query: 194 LE-DKVKILKGENAELAQMVVKLKDHVHRLKEQV 292
E D+ + L+ E + A+ D + +++++
Sbjct: 321 KERDEEQFLEKERRDTARKWDNQGDFIRNMRKEI 354
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 167 RRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLE 298
RR ER++ +ED K +N L + LK + L+ ++LE
Sbjct: 883 RRTQERLANIEDSFSETKQQNENLQRESASLKQINNELESELLE 926
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 98 DSQERIKLERKRQRNRVAASKCRRRK-LERISKLEDKVKILKGENAELAQMVVKLKD 265
D E++ E Q + + K K ++R S+LE+K+ L+ + +++ LKD
Sbjct: 130 DQIEKLNSEISNQNSLILQKKDELEKSIQRCSELEEKINSLESAQSIEQEVISSLKD 186
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 2.0
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +2
Query: 80 LSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKL 259
LS I E ++ R + + + K + K + L+D + ++ NAEL V +
Sbjct: 1634 LSNIKDSLSEDLRTLRSLEDSVASLQKECKIKSNTVESLQDVLTSVQARNAELEDEVSRS 1693
Query: 260 KDHVHRLKEQVLEHANG 310
D + R ++ EH +G
Sbjct: 1694 VDKIRR-RDDRCEHLSG 1709
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 104 QERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLK 283
QE + L K ++ ++ AS + E I K E + +K +N ELA M+++ H L+
Sbjct: 493 QEHLDLLSKYKQIQLKASSAQ----EAIDKKEKMEREMKNKNLELADMILERDRARHELE 548
>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
alpha-glucosyltransferase Alg10|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 445
Score = 26.2 bits (55), Expect = 3.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 421 FYCVIYSYKF*CLRC*FATFMLWMYSLSLSVASEHRSRGRMHQ 549
F C I SY + C F F+LW S+ L S H++ + Q
Sbjct: 218 FSCPILSYG--AVFCSFLAFLLWNGSIVLGDKSHHQASIHLSQ 258
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 296 PTPAPSACERGLSTSPPSVRAPHS 225
P PAPS+ +ST SV +PHS
Sbjct: 1238 PVPAPSSEAPSVSTPRSSVPSPHS 1261
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 50 TVPSAASTPPLSPIDMDSQERIKLER 127
T+ + S PP+SP SQ+ +K+ER
Sbjct: 855 TMKDSHSNPPVSPKYSSSQKHLKVER 880
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 5 DLDRYPTPMVKDEPQTVPSAASTP 76
DL R PTP + E +VP A+ P
Sbjct: 593 DLHRLPTPTSQTESASVPQIANPP 616
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = +2
Query: 260 KDHVHRLKEQVLE----HANGGCHIESHF 334
K H +KE++LE H N C +ESHF
Sbjct: 242 KIHSKIVKEEILENEDHHINFQCELESHF 270
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 551 FWCILPRLRCSLATDKLNEYI 489
+W ILP RC+L+ D E++
Sbjct: 379 YWRILPSTRCALSMDFAREHL 399
>SPAPB1A10.03 |nxt1||mRNA export receptor Nxt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 179 ERISKLEDKVKILKGENAELAQMVVKLK 262
E++ KLE+K+ L + ELAQ V +L+
Sbjct: 116 EQVQKLEEKMSSLVVNDPELAQKVGRLR 143
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 25.8 bits (54), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 247 GGEVERPRSQAEGAGVGARERR 312
GG +E PR +GVG+R+R+
Sbjct: 231 GGTLEAPRKGGPRSGVGSRKRK 252
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +2
Query: 23 TPMVKDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKL 178
+P+ PSA + P S I++ E + + K+++ K R+K+
Sbjct: 72 SPVSSQTTYATPSAYAVPQESEIELHESEMVPQKPKKKKRSRRNRKASRKKI 123
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -3
Query: 296 PTPAPSACERGLSTSPPSVRAPHSPLLKSSLCP 198
P P P S PS PH P+ K + P
Sbjct: 155 PPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIP 187
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.0 bits (52), Expect = 8.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 296 PTPAPSACERGLSTSPPSVRAPHSPLLKSSLCP 198
P P P+A +R + PP+V P L S+ P
Sbjct: 1021 PLP-PTASQRASAYEPPTVSVPSPSALSPSVTP 1052
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.0 bits (52), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 191 KLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEHAN 307
K K+K++ +AEL + D VH++ E EHA+
Sbjct: 517 KNSHKLKMVDRSSAELPNFDYLVSDQVHKIVEINDEHAD 555
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,291,008
Number of Sequences: 5004
Number of extensions: 44046
Number of successful extensions: 188
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 254167452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -