Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M20
(589 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_1576| Best HMM Match : bZIP_1 (HMM E-Value=1.1e-11) 90 1e-18
SB_59208| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_1224| Best HMM Match : bZIP_1 (HMM E-Value=8e-10) 53 2e-07
SB_41031| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09) 46 2e-05
SB_20196| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_41032| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_56664| Best HMM Match : bZIP_1 (HMM E-Value=0.00033) 37 0.014
SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071) 36 0.032
SB_11068| Best HMM Match : bZIP_1 (HMM E-Value=9.2) 36 0.032
SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10) 35 0.043
SB_55988| Best HMM Match : bZIP_1 (HMM E-Value=7.4e-06) 35 0.043
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 35 0.057
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 35 0.057
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.099
SB_43304| Best HMM Match : bZIP_Maf (HMM E-Value=1e-05) 34 0.099
SB_51620| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_40358| Best HMM Match : Pox_A32 (HMM E-Value=0.058) 33 0.23
SB_35764| Best HMM Match : RVT_1 (HMM E-Value=8.1e-13) 32 0.30
SB_19407| Best HMM Match : SURF6 (HMM E-Value=0.43) 32 0.40
SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16) 31 0.53
SB_56783| Best HMM Match : YicC_N (HMM E-Value=8.6e-07) 31 0.70
SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03) 31 0.92
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 31 0.92
SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_2929| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 1.6
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 29 2.1
SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027) 29 2.1
SB_16005| Best HMM Match : bZIP_Maf (HMM E-Value=5.6e-32) 29 2.8
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4) 29 2.8
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 29 3.7
SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_48008| Best HMM Match : M (HMM E-Value=0.0068) 29 3.7
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 29 3.7
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 28 4.9
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 28 4.9
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 28 4.9
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 28 4.9
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_50330| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-17) 28 6.5
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 28 6.5
SB_31791| Best HMM Match : PIG-U (HMM E-Value=0.15) 28 6.5
SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036) 27 8.6
SB_54664| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_43331| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 27 8.6
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 27 8.6
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 27 8.6
SB_42708| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023) 27 8.6
SB_16704| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 108 bits (259), Expect = 4e-24
Identities = 52/103 (50%), Positives = 73/103 (70%)
Frame = +2
Query: 14 RYPTPMVKDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISK 193
R+ ++++ Q VP TPPL PID+D QE +K ERK+ RNR+AASKCR+RKLE+ ++
Sbjct: 103 RFGEIKMEEQSQVVPH---TPPLPPIDLDLQEAVKNERKKLRNRLAASKCRKRKLEKEAE 159
Query: 194 LEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEHANGGCHI 322
LEDKVK+LK +N +L +L+ V LKEQV+ H +GGC +
Sbjct: 160 LEDKVKVLKDKNTKLVSEAQELRRLVCELKEQVMNHVSGGCQV 202
>SB_1576| Best HMM Match : bZIP_1 (HMM E-Value=1.1e-11)
Length = 382
Score = 89.8 bits (213), Expect = 1e-18
Identities = 48/99 (48%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Frame = +2
Query: 35 KDEPQTVP---SAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDK 205
K E Q P S PL PID++ QE +K ERK+Q+NRVAASKCRR+KLER ++LE +
Sbjct: 276 KYEEQAAPPHNSGLGGLPLPPIDLELQEIVKRERKKQKNRVAASKCRRKKLEREAQLEVR 335
Query: 206 VKILKGENAELAQMVVKLKDHVHRLKEQVLEHANGGCHI 322
V+ LK ++ EL + L+ V LK++VLEH GC +
Sbjct: 336 VQQLKEKSIELNAVASALRQQVGELKQRVLEHVAFGCQL 374
>SB_59208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 584
Score = 85.4 bits (202), Expect = 3e-17
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = +2
Query: 35 KDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKI 214
K E QT S L PID++ QE +K ERK+QRNR+A+SKCR+RKLER ++LE++VK
Sbjct: 452 KLESQTTESGV----LQPIDLEIQEVVKRERKKQRNRIASSKCRKRKLEREARLENRVKD 507
Query: 215 LKGENAELAQMVVKLKDHVHRLKEQVLEHAN 307
LK N EL + LK V LK++V++H +
Sbjct: 508 LKERNIELNAVANALKQQVCDLKQRVMDHVD 538
>SB_1224| Best HMM Match : bZIP_1 (HMM E-Value=8e-10)
Length = 496
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/66 (34%), Positives = 44/66 (66%)
Frame = +2
Query: 107 ERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKE 286
E +K+ R+RQRN+ AAS+CR ++ +R+ +L+ + L+ +NAE+ + + L+ + L+
Sbjct: 286 EELKIIRRRQRNKQAASRCREKRRQRLEELQREATELEEQNAEVERDIATLRVEYNELEA 345
Query: 287 QVLEHA 304
+ EHA
Sbjct: 346 LLTEHA 351
>SB_41031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = +2
Query: 62 AASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELA 241
A ST ++P + +ER KL +R+RN+VAASKCR+++ + + L + L+ +N L
Sbjct: 87 AESTEMVTP---EEEERRKL--RRERNKVAASKCRQKRKQHVRNLVQVSEALEVQNNTLQ 141
Query: 242 QMVVKLKDHVHRLKEQVLEHA 304
+ KL D + +L+ + H+
Sbjct: 142 SQITKLHDEIKQLEFMLDSHS 162
>SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09)
Length = 275
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Frame = +2
Query: 92 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHV 271
++ E K +R+RN++AA KCR+R+ E I +LE + + ++ N EL + + +L +
Sbjct: 167 ELSPAELEKRRIRRERNKLAAFKCRQRRKEHIQELEIESEGIEDSNKELEREISELHEQR 226
Query: 272 HRLKEQVLEHA------NGGCHIESH 331
+L+E + H+ NGG +S+
Sbjct: 227 QQLEEMLKTHSCKLSNNNGGSRTKSN 252
>SB_20196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 74 PPLSPIDMDSQERI--KLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQM 247
P ++P + E K E + +NR AA +CRR+K E + LE++V +L+ +N L +
Sbjct: 225 PGIAPSNQQIAEEATRKREMRLMKNREAAKECRRKKKEYVKCLENRVAVLENQNKTLIEE 284
Query: 248 VVKLKD 265
+ LKD
Sbjct: 285 LKALKD 290
>SB_41032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 40.7 bits (91), Expect = 9e-04
Identities = 23/78 (29%), Positives = 41/78 (52%)
Frame = +2
Query: 68 STPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQM 247
S+P + + + R K+ +RQRN+VAASKCR ++ E + L + L+ N++L
Sbjct: 72 SSPQYEELTPEEETRRKV--RRQRNKVAASKCRLKRREHVKNLLKASEELESANSKLESD 129
Query: 248 VVKLKDHVHRLKEQVLEH 301
+ L +L+ + H
Sbjct: 130 IACLNAEKEQLERMLDAH 147
>SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/86 (27%), Positives = 43/86 (50%)
Frame = +2
Query: 41 EPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILK 220
E +T P + + + + +RKR +N+ AA++ R +K + S+L D+ + L+
Sbjct: 422 EIKTTPYSRKNTKSDTVSPKLKTPAQRQRKRVQNKDAATRYRVKKKDEQSRLFDEAEKLE 481
Query: 221 GENAELAQMVVKLKDHVHRLKEQVLE 298
EN +L V L + LK +LE
Sbjct: 482 KENNKLKDEVGSLSKEIEYLKNLMLE 507
>SB_56664| Best HMM Match : bZIP_1 (HMM E-Value=0.00033)
Length = 652
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/87 (24%), Positives = 45/87 (51%)
Frame = +2
Query: 2 ADLDRYPTPMVKDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLE 181
AD D + +++ + A T L + + ++ R+R +N+ AA CR+RK++
Sbjct: 382 ADADSLDIGVSEEKIVEMSVAEFTTFLEKLSDAQAKYVRDVRRRGKNKEAARICRKRKMD 441
Query: 182 RISKLEDKVKILKGENAELAQMVVKLK 262
I L+D++ LK + + ++ ++K
Sbjct: 442 AIETLDDEITRLKQQRQSMFELDGEVK 468
>SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)
Length = 429
Score = 35.5 bits (78), Expect = 0.032
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +2
Query: 50 TVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGEN 229
T+ ST P SP ++ S + +++ + + + + I +LEDK++ LK EN
Sbjct: 262 TLEKGTSTDPRSPSELKSPDNSQVKTGDSKQGLLS--------QSIEQLEDKIRELKQEN 313
Query: 230 AELAQMVVKLKDHVHRLKEQVLEHA 304
++L Q++ K ++ + R+ E LE A
Sbjct: 314 SDLRQLLDKAEEKI-RIYEIDLEKA 337
>SB_11068| Best HMM Match : bZIP_1 (HMM E-Value=9.2)
Length = 106
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 68 STPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKL 196
S+P + + + R K+ +RQRN+VAASKCR ++ E + L
Sbjct: 64 SSPQYEELTPEEETRRKV--RRQRNKVAASKCRLKRREHVKNL 104
>SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10)
Length = 508
Score = 35.1 bits (77), Expect = 0.043
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 20 PTPMVKDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLE 199
P + DEP V SA + PL+PI+ ++++ ++ N KCR E ISK +
Sbjct: 11 PRHKMADEPAQVASAENKLPLTPIENARRQKVCRFYAKKGNCRFGEKCRFVHKEIISKED 70
Query: 200 DK 205
DK
Sbjct: 71 DK 72
>SB_55988| Best HMM Match : bZIP_1 (HMM E-Value=7.4e-06)
Length = 150
Score = 35.1 bits (77), Expect = 0.043
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +2
Query: 38 DEPQTVPSAASTPPLSPIDMDSQER------IKLERKRQRNRVAASKCRRRKLERISKLE 199
D ++ S S SP ++ ++R I LE K +R+R +A +CR RK R LE
Sbjct: 43 DSNSSIKSPHSPKITSPRKLEGKKRGRKPSQIDLEAKLERSRQSARECRARKKLRYKCLE 102
Query: 200 DKVKILKGENAELAQ 244
D V + E ++L Q
Sbjct: 103 DTVTRKESEVSKLRQ 117
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 34.7 bits (76), Expect = 0.057
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 104 QERI-KLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRL 280
++RI LE++ R+++ S+ L +L+++ K LK E+ ELA+ KLKD + L
Sbjct: 1918 EQRIASLEKEASRSQMTGSE--GEVLTENDRLKEENKTLKEEHTELAEQNEKLKDALEEL 1975
Query: 281 KEQV 292
+E V
Sbjct: 1976 REAV 1979
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 34.7 bits (76), Expect = 0.057
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +2
Query: 104 QERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLK 283
Q ++L +QR S R K ER KL ++ ++K NA+ M ++++ RL+
Sbjct: 764 QLHVELTNIKQRLAETESASSRLKGER-EKLHKELTVMKENNAQWKDMCERIQEDKERLQ 822
Query: 284 EQVLEHANGGCHIESHF*SRCRRL 355
+++++ +ES F S +R+
Sbjct: 823 KEMIDLQKSMSKVESSFGSSQQRV 846
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 33.9 bits (74), Expect = 0.099
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +1
Query: 4 RPRSVPDTYGERRASNSAQRSQHAAALPY*HGL-SRENQTRTQT-TKESSRSVQMSTSQT 177
R R P T +N + R+ HA G +R +T T++ T+ SRS S +T
Sbjct: 216 RTRPSPSTASSANETNESGRTTHARTAASARGRGNRRGRTGTRSSTRGRSRSTATSRGRT 275
Query: 178 RTYL*TRGQSEDFKRGECGARTDGGEVERPRSQ 276
RT TR +S R +R+ G + +++
Sbjct: 276 RTRTSTRRRSHTSSREGTRSRSTRGRKTKSKNR 308
>SB_43304| Best HMM Match : bZIP_Maf (HMM E-Value=1e-05)
Length = 96
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 95 MDSQERIKLERKRQ--RNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDH 268
+++ E ++L ++R+ +NR+ AS C+++++ E + +IL E L + K+K
Sbjct: 4 LENSEIVRLRKRRRSLKNRIYASVCKKKRVAEQKTYEVQNRILVKERNTLKMELEKVKTE 63
Query: 269 VHRLKE--QVLE 298
++KE Q LE
Sbjct: 64 RDKIKEAYQTLE 75
>SB_51620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 74 PPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAEL 238
P S ++D ER + + +RNR AA++CR ++ + +LE K L N +L
Sbjct: 365 PRRSQEELDPDERRR--KFLERNRAAATRCREKRKIWVQQLEKKADDLSNTNTQL 417
>SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 107 ERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKI-LKGENAELAQMVVKLKDHVHRLK 283
ER++ E+K A ++ + L I +V I L+G+ E ++ VKL++ V+RLK
Sbjct: 176 ERLESEQKEHAQAEAKTQKSEQFLRNIEAKSKQVIIALRGQLDEASEEKVKLEEEVNRLK 235
Query: 284 EQV 292
QV
Sbjct: 236 NQV 238
>SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 176 LERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKE 286
L R+S LE++ +LK +NA L V+ L+ +H++ +
Sbjct: 133 LRRVSSLEEENTVLKSKNAALTLEVLSLRAQIHKINQ 169
>SB_40358| Best HMM Match : Pox_A32 (HMM E-Value=0.058)
Length = 874
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 19 PDTYGERRASNSAQRSQHAAALPY*HGLSRENQTRTQTTKESSRSVQMSTSQTRT 183
PD + R+ +SA RS+ +AA+ HG+SR TR +T + S + T+T
Sbjct: 761 PDGHQGARSGDSASRSRVSAAI---HGVSRHLDTRVHSTHIRTMSTTQQSKITKT 812
>SB_35764| Best HMM Match : RVT_1 (HMM E-Value=8.1e-13)
Length = 362
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 317 GSRRSRAPTPAPSACERGLSTSPPSVRAPHSPLLKSSLCP 198
G+ S P P C+R + T PSV P S +SSL P
Sbjct: 67 GAESSSMPDPVRKTCQRRVKTFHPSVDTPMSTFGRSSLGP 106
>SB_19407| Best HMM Match : SURF6 (HMM E-Value=0.43)
Length = 443
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 14 RYPTPMVKDEPQTVPSAASTPPLSPIDMDSQ-ERIKLERKRQRNRVAASKCRRRKLERIS 190
R + M+ TVP+ TPPL P+ +DS+ +R+ R R+ + + R+RKL+R+
Sbjct: 282 RERSKMLSRGSSTVPT---TPPL-PVVLDSKLQRLNKRIAGVRQRLESLRGRKRKLQRMR 337
Query: 191 KLEDKVKILK 220
+ ++ V+ K
Sbjct: 338 EEQETVRHFK 347
>SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)
Length = 298
Score = 31.5 bits (68), Expect = 0.53
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +2
Query: 35 KDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKI 214
KDE + P D ++ + +R +N VAA + R + ++ ++ K K
Sbjct: 143 KDEYEYNPLPIGKKARRKFVPDQEKDDRYWARRVKNNVAARRSRDMRRQKEIEISMKWKQ 202
Query: 215 LKGENAELAQMVVKLKD 265
L+ ENA L + + +LKD
Sbjct: 203 LEKENARLREELQQLKD 219
>SB_56783| Best HMM Match : YicC_N (HMM E-Value=8.6e-07)
Length = 251
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 218 KGENAELAQMVVKLKDHVHRLKEQVL 295
K +AE+ ++VV +KD + ++KEQVL
Sbjct: 223 KSNHAEMQKLVVMMKDELEKIKEQVL 248
>SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03)
Length = 307
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/61 (24%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +2
Query: 116 KLERKRQRNRVAASKCR---RRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKE 286
+LE + ++ +V+ + R L R++++E++ +L+ E+ + ++ KLK + +KE
Sbjct: 86 ELEEESRKYKVSLQRSRVGDAIDLRRLAEVEEENTVLQAESRKQISLISKLKSDIKSIKE 145
Query: 287 Q 289
Q
Sbjct: 146 Q 146
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 30.7 bits (66), Expect = 0.92
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +2
Query: 92 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHV 271
++D + R E + +R+R + +RR+ E K ED+VK + + + +KL +
Sbjct: 623 EIDDEMRKLEEERTERDRQKEEERKRREEEEKKKREDEVKREEEGRRQKVEAELKLIEDE 682
Query: 272 HRLKEQVLE 298
H+ + + LE
Sbjct: 683 HKQRLEELE 691
>SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 122 ERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 265
ERKR++ A +C R ++E +L K ++L+ N +L + V L+D
Sbjct: 648 ERKRRQEAELARQCHRNEIE---QLTFKTRLLEQSNTDLLRAVRSLED 692
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 35 KDEPQTVPSAASTPPL---SPIDMDSQERIKLERKRQRNRVAASKCRR-RKLERISKLED 202
+DE + +PS A+ PPL P +Q + E ++R + K +R R+L+R + ++
Sbjct: 948 EDEYEILPSEAAAPPLPDTRPGASPTQSEVDAEESKKREKKDKEKEKRERELQRKKERDE 1007
Query: 203 KVKILKGENAELAQMVVKLKDHVHRLK 283
+ + + E E + K ++ R K
Sbjct: 1008 QKRKKEEEKREREEKKRKEEERKRREK 1034
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 92 DMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKG 223
+ D Q+R K E KR+R + R++ E+ K K+ LKG
Sbjct: 1004 ERDEQKRKKEEEKREREEKKRKEEERKRREKADKELKKIHKLKG 1047
>SB_2929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 SPIDMDSQERIKLERKRQRNRVAASKCRRRKLE-RISKLEDKVKILKGENAELAQMV 250
SPI+ D +E +KL +K ++ +V + E KL + IL G++ L+ +V
Sbjct: 99 SPIESDEKEIVKLAKKLKKEKVNVDVVNFGEEESNTEKLTAFINILNGKDGNLSHLV 155
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 299 APTPAPSACERGLSTSPPSVRAPHSP 222
APTP P + T PP RAP +P
Sbjct: 95 APTPTPMVAQSVAPTPPPPPRAPETP 120
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/66 (24%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 98 DSQERIKLERKRQRNRVAASKCR---RRKLERISKLEDKVKILKGENAELAQMVVKLKDH 268
+ QER++ +R+++ R+A + R +RK+E + L++ +K + + AE + K +
Sbjct: 225 EEQERLEQQRRQREQRIAEKRKRLEEQRKVESLHLLKELLKRVADKRAEEEEEKRKREKE 284
Query: 269 VHRLKE 286
+ L++
Sbjct: 285 LEMLRQ 290
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 29.5 bits (63), Expect = 2.1
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +2
Query: 32 VKDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVK 211
++ + + + +++ S D++ ++++KLE R+RN +A ++KL I K+E K
Sbjct: 1084 LEKQAKALNDGSNSTKTSSQDLE-KKKMKLEEDRKRNEIA-----KQKLASIRKIE---K 1134
Query: 212 ILKGENAELAQMVVKLKDHVHRLKEQVLEHANGGCH-IESHF*SRCRR 352
IL + + K+HV L++ LE H E+ R RR
Sbjct: 1135 ILTFIETARWSAIKRAKEHVKSLQKGGLEIKKRDLHESENEIEKRRRR 1182
>SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027)
Length = 804
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 40 RASNSAQRSQHAAALPY*HGLSRENQTRTQTTKESSRSVQMSTSQTRT 183
R+ +SA RS+ +AA+ HG+SR TR +T + S + T+T
Sbjct: 698 RSGDSASRSRVSAAI---HGVSRHLDTRVHSTHIRTMSTTQQSKITKT 742
>SB_16005| Best HMM Match : bZIP_Maf (HMM E-Value=5.6e-32)
Length = 160
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 89 IDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLED 202
+ + Q RIK R+ +NR A CR +++ + LE+
Sbjct: 79 LSTEEQSRIKYRRRTLKNRGYAHNCRIKRISQKKSLEE 116
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 359 RRGDGIAIRSAIRCGSR-RSRAPTPAPS-ACERGLSTSPPSVRAPHSP 222
RR + RS R GSR R R+P+ +P ER S SP R HSP
Sbjct: 130 RRSPSLERRSRSRSGSRERRRSPSRSPERRRERSFSNSPK--RERHSP 175
>SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4)
Length = 169
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 35 KDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAAS---KCRRRKLERISKLEDK 205
K E +TVP T S +E+ + E ++ A S K ++RK+E + +E+K
Sbjct: 68 KTEEETVPETVQTETPSARKKKKKEKEQEETMEEQQTEATSSAKKKKKRKVEDVEDVEEK 127
Query: 206 VK 211
V+
Sbjct: 128 VE 129
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 RRPRSVPDTYGER-RASNSAQRSQHAAALPY*HGLSRENQTRTQTTKESSRSVQMSTSQT 177
R PR + ER R S RS+H + + R++ + + ++ SRS + S++
Sbjct: 244 RSPRRNSQRHKERSRYHRSRSRSRHRRSRSNSPSM-RKSDRKFKKSQRKSRSRSRNRSRS 302
Query: 178 RTYL*TRGQSEDFKRGECGARTDGGEVERPRSQA 279
+ +R S R + G+R++ ++ RS++
Sbjct: 303 HSRKRSRSSSRSKSRKKSGSRSNSQSKQKSRSRS 336
>SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 305 SRAPTPAPSACERGLSTSPPSVR 237
SRAPT +PS C + PPS R
Sbjct: 310 SRAPTRSPSGCSSDSTNPPPSPR 332
>SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 32 VKDEPQTVPSAASTPPLSPIDMDSQERIKLER 127
VK + ++ +TPP SP +D RIK+ER
Sbjct: 821 VKQDIRSRSRGENTPPKSPTRLDLSPRIKIER 852
>SB_48008| Best HMM Match : M (HMM E-Value=0.0068)
Length = 1068
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 185 ISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLE 298
+ LE VKIL+ +EL + + LK+ H L++ + E
Sbjct: 563 VDSLEADVKILREHESELKKEMTSLKERNHNLEQMLNE 600
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 119 LERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKD 265
L + +R +CRRR E ++ L+ K+K L+ + Q++ K+
Sbjct: 223 LNERLERKESTLMECRRRHDEELTSLQKKIKNLEERLSSTNQLISSTKN 271
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = +2
Query: 5 DLDRYPTPMVKDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLER 184
D P V+ EP S PP P + +S+E + E++ + + + E
Sbjct: 3097 DAPNSPEKAVQSEPWYWTWLFSRPPQQPEEKESEEANEHEQEHEHD----TSGDHIHFEP 3152
Query: 185 ISKLEDKVKILKGENAELAQMVVKLKDHVHR 277
I L DKV+ + GE A+ Q V K + ++R
Sbjct: 3153 IIPLPDKVERVTGEEAD--QEVFKWRAKLYR 3181
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 104 QERIKLERKRQRNRVAASKCRRRK---LERISKLEDKVKILKGENAELAQMVVKLKDHVH 274
Q++++ E+K + ++ K +R K ER+ + E+K K + E A+ + + +D +H
Sbjct: 928 QQQLEKEKKEKEKKLLIEKEKREKEKQKERLREKEEKEKQKEAERAKKEKERLLQEDKLH 987
Query: 275 RLKEQ 289
+E+
Sbjct: 988 EKEEK 992
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 98 DSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHR 277
+ Q+ +K ER R+ A +R LE KLE++ K + + ELA++ K ++ R
Sbjct: 191 ERQKALKEERMRKLQE-EARLAAQRALEEKRKLEEERKEQERKEKELAELEKKRQEERRR 249
Query: 278 LKEQ 289
+E+
Sbjct: 250 QEEK 253
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 101 SQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRL 280
+QE ++ ER+ + NR+ + R ++ E K ++ + GE+ E +KLK+ +
Sbjct: 192 AQEEMRREREEEENRILEEEERVKREEEEKKAKEVEEKRMGEDEE----QIKLKEEEVEI 247
Query: 281 KE 286
KE
Sbjct: 248 KE 249
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 104 QERIKLERKRQRNRVAASKCRRRKLERISKLEDK 205
Q R K RKR+R R + + RRR+ R S+L K
Sbjct: 684 QRRRKRRRKRRRQRRSRRRRRRRRRRRRSQLRRK 717
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 125 RKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLE 298
+K+++ V + + K RIS LE +V +L NAEL + K H K + +E
Sbjct: 272 KKKEKQEVESDL--KYKTARISTLEKEVAVLHQANAELKNKADRFK-HTEEEKNKAIE 326
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 107 ERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKI-LKGENAELAQMVVKLKDHV 271
E +KLER++ + + K + K+ER + + I + EN++L++ V L+ V
Sbjct: 972 EEVKLERRKHQEELETLKDKTLKVERELRDSQQENIKMNIENSKLSRKVSSLESSV 1027
>SB_50330| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-17)
Length = 452
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 131 RQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQVLEHAN 307
+Q N+ + R ER +K D K + + + L DH L QV EH N
Sbjct: 311 KQTNKRTNEQTNERTNERTNKQRDNKNEKKINKTTTSVIYLSLCDHERHLLVQVQEHRN 369
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +2
Query: 197 EDKVKILKGENAELAQMVVKLKDHVHRLKEQ---VLEHAN 307
E+K++ LK N+EL + +L+D +L+++ +L+ AN
Sbjct: 334 EEKIRKLKKRNSELVSIARQLEDKAKKLQDEKNAILKQAN 373
>SB_31791| Best HMM Match : PIG-U (HMM E-Value=0.15)
Length = 1366
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 373 SLECGGEATASRSE-VRFDVAAAVRVLQHLLLQPVNVVFQ 257
S+ G A SE ++ +V RVL +L+LQ NV+FQ
Sbjct: 118 SITLSGVVFADNSECLKVEVVGIPRVLSNLMLQLKNVLFQ 157
>SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036)
Length = 1211
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 89 IDMDSQERIKLERKRQRNRVAASKCRRRKLE-RISKLEDKVKILKGENAELAQMVVKLKD 265
ID S E+++ + + ++ + A + L ++ LEDK+ +N+EL V K +
Sbjct: 31 IDGRSNEQLEAKVMQLQSTLVAHESTIESLRGEVTVLEDKLHNETSKNSELEGKVEKQRQ 90
Query: 266 HVHRLKEQVLE 298
+ R+K + E
Sbjct: 91 DIKRIKREKSE 101
>SB_54664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 170 RKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLK 283
R+LER+ + E K++ ++ E + VKLKD + LK
Sbjct: 42 RELERLRESEQKIRQVQEEIPKCITESVKLKDLLEELK 79
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 179 ERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQV 292
E+ ++L+ K L ENAELA+ L+ + RLK+++
Sbjct: 287 EQFARLQAKYDELVAENAELAENCDLLEKNEARLKKEI 324
>SB_43331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 65 ASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQ 244
AST L P +R ++ RN V + +RK +R + E+K K L + + +
Sbjct: 67 ASTIDLLPRKKFLNDREYMKELFYRNDVVVTGPEKRKYKRTTHWEEKSKKLIRDTKKCLK 126
Query: 245 MVVKLKDHVHRLKEQVLEHANGGCHI 322
++ L + H + +GG HI
Sbjct: 127 VMPLLSNGEH--PNSIFTSVDGGNHI 150
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 128 KRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKEQV 292
K ++ K R E++ +L KV L+GE E + KLK + +EQ+
Sbjct: 1322 KALEKEISNLKDRNNNGEKVQELLHKVTYLEGELKERSVETEKLKQTLQEREEQI 1376
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 20 PTPMVKDEPQTVPSAASTPPLSPIDMDSQER-IKLERKRQR 139
PT + EP T P+ L P D + ER + +E K+++
Sbjct: 36 PTTVPTTEPTTAPTTPEPTTLEPTDPPTTERPLTMEEKKEQ 76
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 291 TCSFSL*TWSFNFTTICASSAFSP 220
+CS TW +N ++ C S AFSP
Sbjct: 705 SCSSGEQTWVYNSSSTCLSLAFSP 728
>SB_42708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 101 SQERIKLERK--RQRNRVAASKCRRRKLERISKLEDKVKILKGENAEL 238
S R + E K + R +VAA + R R ER+S++++ L+ EN EL
Sbjct: 107 SSRRTQNESKSCKARQKVAAQEARERNEERLSEIDE----LERENREL 150
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 98 DSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHR 277
+ +ER + +R+R+ R+A K RR ER+ + E++ ++ E + + ++ V R
Sbjct: 1040 EERERREADRRREEERIAEQK-RRDDEERLRREEEERRL----EEERRREEERKREEVRR 1094
Query: 278 LKEQ 289
L+E+
Sbjct: 1095 LEEE 1098
>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
Length = 873
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 23 TPMVKDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLE 181
+P ++ +PS AS+P I S ER E K+++++ +C ++ L+
Sbjct: 607 SPAPSNDTSPIPSGASSPAAQRIPA-SAEREFRELKKEKSKFFKHECHQKNLK 658
>SB_16704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 47 QTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKI 214
Q + S ST D+D ++ ++ K +RN KCR L+R K + K+
Sbjct: 668 QLIKSCQSTIQHLCSDVDPKDLLRCLEKHKRNPQMTKKCREIVLKRQKKQYEDYKL 723
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,366,453
Number of Sequences: 59808
Number of extensions: 371406
Number of successful extensions: 1828
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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