Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M20
(589 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 27 0.60
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 2.4
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 24 3.2
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 24 3.2
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 5.5
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 23 7.3
AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein. 23 9.7
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 9.7
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 9.7
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 26.6 bits (56), Expect = 0.60
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -3
Query: 356 RGDGIAIRSAIRCGSRRSRAPTPAPSACERGLSTSPPSVRAPH 228
R D I + +A+R AP P P RGL SP +VRA H
Sbjct: 1098 REDSI-LMAAVRA-EEAGEAPPPIPMR-RRGLPPSPRTVRARH 1137
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.6 bits (51), Expect = 2.4
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +2
Query: 107 ERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQMVVKLKDHVHRLKE 286
E +KLE + + + +K E+ KLE+++ L+ E++ ++ V LK+
Sbjct: 818 ETLKLEIEELQKGIVTAK------EQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQ 871
Query: 287 QVLEH 301
Q+ +H
Sbjct: 872 QIKQH 876
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 24.2 bits (50), Expect = 3.2
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +1
Query: 97 GLSRENQTRTQTTKESSRSVQMSTSQTRTYL*TRGQSEDFKRGECGARTDGGEVERPRSQ 276
G R +++R+++ +SSRS S S++ + +RG + + +R+ R RS+
Sbjct: 401 GKKRSSRSRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSK-TRTSRSRSR 459
Query: 277 AEGAGVGARERRLPHR 324
G RL R
Sbjct: 460 TPLPARGHVRARLTRR 475
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 24.2 bits (50), Expect = 3.2
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +2
Query: 17 YPTPMVKDEPQTVPSAASTPPLSPIDMDSQERIKLERK 130
YP K P + +TP P+ + QE I L +
Sbjct: 428 YPDVFKKRAPPNLSPTINTPETDPVPITRQEIINLANR 465
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.4 bits (48), Expect = 5.5
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Frame = +2
Query: 95 MDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKIL-------KGENAELAQMVV 253
+DS+ K + + ++ + K L+R KL D +K K AEL+Q V
Sbjct: 417 LDSEINKKAQIEENYKKIESEK--NEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVG 474
Query: 254 KLKDHVHRLKEQV--LEHANGGCHIESH 331
K+ +H L+ ++ + G I+ H
Sbjct: 475 TSKERIHELQSELDNVREQLGDAKIDKH 502
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.0 bits (47), Expect = 7.3
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 71 TPPLSPIDMDSQERIKLERKRQRNRVAASKCRRRKLERISKLEDKVKILKGENAELAQM- 247
T P S+E +++ + Q + + + ++ E + ++ LK + EL +M
Sbjct: 759 TSASEPAGASSREIEQMQIRAQEIQTQINYLQEQQGELEATIQRLTAKLKQQEMELKRMH 818
Query: 248 --VVKLKDHVHRLKEQV 292
V L + RLKEQV
Sbjct: 819 MDVASLTQQMPRLKEQV 835
>AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein.
Length = 603
Score = 22.6 bits (46), Expect = 9.7
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 26 PMVKDEPQTVPSAASTPPLSPIDMDSQERIKLERKRQRNRVAAS-KCRRRKLERISKLED 202
P+V++ + V +P S + D+Q+++ L++ + V+ L R K +
Sbjct: 285 PVVEEVKRVVMLFKKSPKASQMLADTQKKLNLDQLKMIQEVSTRWNSGYDMLNRFYK--N 342
Query: 203 KVKILKGENAELAQMVVKLKDHVHRLKEQVL 295
K+ +L A+ +M + L+ H EQ++
Sbjct: 343 KIALL--SCADSLKMKISLESHDWEAIEQIV 371
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 22.6 bits (46), Expect = 9.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 587 RYYTSRLHPERRFWCILPRLRCSLATDKLNEYI 489
RYY + + R+ + + S A DK++EY+
Sbjct: 359 RYYMTLIDDHSRYTFVYFLKKKSEAEDKIHEYV 391
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 22.6 bits (46), Expect = 9.7
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 116 KLERKRQRNRVAASKCRRRK 175
+ ER+R+ NR+A ++ R R+
Sbjct: 1086 RTERRREVNRLAVARLRERQ 1105
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,447
Number of Sequences: 2352
Number of extensions: 11659
Number of successful extensions: 41
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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