Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M19
(671 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 44 1e-04
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 40 0.001
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 40 0.002
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 38 0.005
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 38 0.008
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 37 0.011
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 37 0.011
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 36 0.019
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 31 0.70
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 31 0.70
At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family pr... 30 1.2
At1g30220.1 68414.m03697 sugar transporter family protein simila... 29 2.1
At5g57000.1 68418.m07114 expressed protein similar to unknown pr... 28 4.9
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 28 4.9
At1g79890.1 68414.m09334 helicase-related similar to CHL1 potent... 28 6.5
At4g20190.1 68417.m02952 hypothetical protein 27 8.6
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 27 8.6
At2g46530.2 68415.m05803 transcriptional factor B3 family protei... 27 8.6
At2g46530.1 68415.m05802 transcriptional factor B3 family protei... 27 8.6
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 43.6 bits (98), Expect = 1e-04
Identities = 43/160 (26%), Positives = 60/160 (37%)
Frame = +1
Query: 34 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHAD 213
A ++ P N P + DA WIQ G P K VLG G W+L + + S P
Sbjct: 223 AALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAP---T 277
Query: 214 XGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDNGEG 393
G P G + Y +I +++ NG S G Y + G
Sbjct: 278 TGAAISP----DGSIGYGQIRKFIVD---NGATTVYN-----STVVGDYCY-------AG 318
Query: 394 GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGL 513
W+ Y+D + K Y K + L G + DD GL
Sbjct: 319 TNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGL 358
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 40.3 bits (90), Expect = 0.001
Identities = 41/167 (24%), Positives = 65/167 (38%)
Frame = +1
Query: 34 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHAD 213
A +Y P + ++ D+ + W + G P K VLG G W L +D +++G
Sbjct: 202 ASLYLPTDG---RSGDSGVRDWTEAGLPAKKAVLGFPYYGWAWTL-ADPDVNGY------ 251
Query: 214 XGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDNGEG 393
GP G +SY ++ +++ NG KV+D G Y + G
Sbjct: 252 DANTTGPAISDDGEISYRQLQTWIVD---NG----ATKVHD-DMMVGDYCY-------AG 296
Query: 394 GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYP 534
W+ Y+ + K Y K K L G + DD L + P
Sbjct: 297 TTWIGYDSEKSIVTKVIYAKQKGLLGYFSWHVGGDDNSELSSAGSTP 343
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/136 (26%), Positives = 56/136 (41%)
Frame = +1
Query: 31 TAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHA 210
TA ++ N + + D+ + WI++G P K VLG S G W L +D + +G A
Sbjct: 214 TAGLHVSSNNEG-PSGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKD-TGYNAAAA 271
Query: 211 DXGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDNGE 390
++ G ++Y +I N+ + KV DP K G Y F
Sbjct: 272 GVAKSEDDVSE-DGSINYAQI-------NKFIRDEEAAKVYDP-KVVGHYCFAKK----- 317
Query: 391 GGFWVSYEDPDTAGNK 438
W+ YED + K
Sbjct: 318 --IWIGYEDTQSVEAK 331
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 38.3 bits (85), Expect = 0.005
Identities = 42/168 (25%), Positives = 70/168 (41%)
Frame = +1
Query: 34 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHAD 213
A ++ P N ++ D+ ++ W++ P K VLG S G W L+ D+E +G D
Sbjct: 211 AALFDPSNPAG-RSGDSGLSKWLEAKLPAKKAVLGFSYCGWAWTLE-DAENNGY-----D 263
Query: 214 XGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDNGEG 393
+ G G ++Y +I +I+ NG +DP+ G Y + G
Sbjct: 264 AATD-GAAISSDGSITYAKIRNYIID---NG----AATFHDPAV-IGFYCY-------VG 307
Query: 394 GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYPI 537
W+ Y+D + +K Y K K L G + D GL + +
Sbjct: 308 TTWIGYDDNQSIVSKVRYAKLKGLLGYFSWHVGADYNCGLSRAGSFSL 355
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/80 (31%), Positives = 34/80 (42%)
Frame = +1
Query: 34 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHAD 213
AP+Y P P + DA + W Q G P K VLG G W L +D++ H
Sbjct: 221 APLYDPITTGP--SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCL-TDAK------NHNY 271
Query: 214 XGGEAGPYTKVQGLLSYPEI 273
+GP G + Y +I
Sbjct: 272 YANSSGPAISPDGSIGYDQI 291
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 34 APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 183
A +Y P + P D + +W++ G P K V G G +W LD D +
Sbjct: 191 AGLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 37.1 bits (82), Expect = 0.011
Identities = 47/182 (25%), Positives = 69/182 (37%), Gaps = 2/182 (1%)
Frame = +1
Query: 34 APIYAPQN-RDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHA 210
A ++ P N + P D + WI+ G P K VLG G TW L S ++
Sbjct: 210 AALFDPSNPKGPC--GDYGLKEWIKAGLPAKKAVLGFPYVGWTWSLGSGND--------- 258
Query: 211 DXGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDNGE 390
+ T +G ++Y +I +++ R V D S G Y F
Sbjct: 259 --AATSRVATSAEGSINYDQIKRLIVDHK-------ARPVFD-STVVGDYCF-------A 301
Query: 391 GGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLC-TGDKYPILGAAKYRL*T 567
G + Y+D + K Y K K L G + DD GL G + + + L T
Sbjct: 302 GTSLIGYDDHQSVVAKVKYAKQKGLLGYFSWHVGADDNFGLSRAGSSFCTYESLFFSLFT 361
Query: 568 FS 573
FS
Sbjct: 362 FS 363
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 36.3 bits (80), Expect = 0.019
Identities = 40/174 (22%), Positives = 60/174 (34%)
Frame = +1
Query: 13 PKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISG 192
P + T P A + + D+ + WI G P K VLG G W L
Sbjct: 105 PGCTEVTGPPAALYLQSDGPSGDSGVKDWIDAGLPAEKAVLGFPYYGWAWTLAD------ 158
Query: 193 VPPIHADXGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRL 372
P H GP G +SY ++ +++ V+D + G Y +
Sbjct: 159 -PKNHGYYVDTTGPAISDDGEISYSQLKTWIVDNKAT-------TVHD-NIVIGDYCY-- 207
Query: 373 PDDNGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYP 534
G W+ Y+ ++ K Y K K L G + DD L + P
Sbjct: 208 -----AGTTWIGYDSEESIVTKVIYAKQKGLLGYFSWQVGGDDKSELSSAGSSP 256
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 109 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKL 285
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 286 INPNQNGKRPHLRKVNDPSK 345
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 109 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKL 285
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 286 INPNQNGKRPHLRKVNDPSK 345
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family
protein bHLH protein, Arabidopsis thaliana,
PATCHX:E255557
Length = 589
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 331 NDPSKRFGTYAFRLPDDNGEG--GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDF 504
N+ FG++AF L D GE G W+S + +G A+ V N G S +
Sbjct: 253 NNGGGEFGSWAFNLNPDQGENDPGLWISEPNGVDSGLVAAPV-MNNGGNDSTSNSDSQPI 311
Query: 505 RGLCTG 522
LC G
Sbjct: 312 SKLCNG 317
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 62 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 172
++Y +PT++ + GF R LSLV+A L+ GS I
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSII 330
>At5g57000.1 68418.m07114 expressed protein similar to unknown
protein (gb|AAF21159.1)
Length = 187
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 415 LRKKPRSHLHHYHQE 371
L++KP HLHH+H+E
Sbjct: 87 LKEKPPRHLHHHHKE 101
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 127 LVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAK 282
LV+G + T L SE G+P D GP K+ L Y E+ K
Sbjct: 372 LVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEK 423
>At1g79890.1 68414.m09334 helicase-related similar to CHL1 potential
helicase protein (GI:2632247) [Homo sapiens]; similar to
helicase GB:AAB06962 [Homo sapiens]
Length = 882
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = +1
Query: 343 KRFGTYAFRLPDDNGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 501
+ F L ++NG+G +S T+G Y+K L G + +D+
Sbjct: 504 RAFSDMLVALTNNNGDGRIIISRTSSSTSGQHGGYIKYVMLTGAKLFSEVVDE 556
>At4g20190.1 68417.m02952 hypothetical protein
Length = 389
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/88 (21%), Positives = 34/88 (38%)
Frame = -3
Query: 522 SSAKTTKIIHGKVHDGHTAKVLCFHVTSFVSGRVRIFVRNPEATFTIIIRKAEGIGPKTF 343
S+ +K I+ DG LC ++ F G+ R +++FT R ++
Sbjct: 195 SNTANSKSINS-FEDGFKCSALCLYLPGFSKGKPVRSSRKGDSSFT---RTTTMTSSQSM 250
Query: 342 ARIVDLTKMRTLSVLVGVNKFGANFWVA 259
AR + LS + +F W +
Sbjct: 251 ARTASIRDTAVLSARASLERFECGSWTS 278
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 27.5 bits (58), Expect = 8.6
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Frame = +1
Query: 70 QNADAAINYWIQNGA-PTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKV 246
++ ++ + W+ P K VLG G W L+ D+E +G A G P
Sbjct: 231 RSGNSGLRKWLDEAKLPPKKAVLGFPYCGWAWTLE-DAENNGYDA--ATDGAAISP---- 283
Query: 247 QGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDNGEGGFWVSYEDPDT 426
G ++Y +I +++ NG +DP+ G Y + G W+ Y+D +
Sbjct: 284 DGSITYAKIRNYIVD---NGAATF----HDPAV-IGFYCY-------VGNTWIGYDDNQS 328
Query: 427 AGNKASYVKTKNLGG 471
K Y K L G
Sbjct: 329 IVYKVKYAKFTGLLG 343
>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 514
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 266 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 376
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 263 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 300
>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 601
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 266 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 376
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 350 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 387
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,695,270
Number of Sequences: 28952
Number of extensions: 363567
Number of successful extensions: 968
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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