Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M18
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z81082-5|CAB03093.2|  429|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z78064-5|CAB01511.1|  473|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AC084158-11|AAK68558.1|  555|Caenorhabditis elegans Hypothetical...    28   4.5  
U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    28   6.0  
Z83222-1|CAB05712.1|  410|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical
           protein ZK84.1 protein.
          Length = 801

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 20/82 (24%), Positives = 39/82 (47%)
 Frame = +1

Query: 121 SSDTTTTTLAWKDSNMVMRLPTVSSTRKVVS*RT*AQRTKLSPSAGSSLTSAPMESPTP* 300
           S ++ T TL   +  ++  LP  +  +K++   +    ++    AG +   AP+   TP 
Sbjct: 164 SDNSVTETLTATEPAII--LPPPAEPKKIIPPASGYVTSEQEQGAGDAPEPAPVVEETPA 221

Query: 301 PTPLTRKDSSPAVLTSQSLKSP 366
           PTP   +  +PA   S ++ +P
Sbjct: 222 PTPAAEETPAPATEASNAVGTP 243


>Z81082-5|CAB03093.2|  429|Caenorhabditis elegans Hypothetical
           protein F42G4.2 protein.
          Length = 429

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 29/112 (25%), Positives = 48/112 (42%)
 Frame = +1

Query: 247 PSAGSSLTSAPMESPTP*PTPLTRKDSSPAVLTSQSLKSPYRIQXXXXXXXXXXXXXXXX 426
           P A  +L S P +SPT  P P     + P+VL+  SL     ++                
Sbjct: 29  PKAKPTLVSVPSKSPTKVP-PTPPVLAPPSVLSIPSLLQAAHVKDATAMSPNLPYREGKA 87

Query: 427 XXXHRRSDL*YDPDFNKPIYVLVTKKKKKNSRSTVSISLISNSARGADMSSK 582
               RR +   + +  +P    + +KKK+++  TVSI   ++S   A  +SK
Sbjct: 88  T---RRKERVVEKEKEQPKTATI-RKKKQSATQTVSIEHRTSSENDAPKNSK 135


>Z78064-5|CAB01511.1|  473|Caenorhabditis elegans Hypothetical
           protein F57B1.2 protein.
          Length = 473

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 244 SPSAGSSLTSAPMESPTP*PTPLTRKDSSPAVLT 345
           SP    S++   +  P    TP+TR+DS P  +T
Sbjct: 16  SPPVTRSVSRTGVHQPLDTSTPVTRRDSQPGTIT 49


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 184  TVSSTRKVVS*RT*AQRTKLSPSAGSSLTSAPMESPTP*PTPLTRKDSSPAVLTSQS 354
            + SS   V +  T    T  S SA S  +S+P+ S +  P P T   S+P    SQS
Sbjct: 1226 STSSGSTVTTGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQS 1282


>AC084158-11|AAK68558.1|  555|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.14 protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 235 TKLSPSAGSSLTSAPMESPTP*PTPLTRKDSSPAVLTSQSLKSPYR 372
           TK SP+   + TS P  +PT  P P      +P +  + S + P R
Sbjct: 255 TKTSPTKPPTPTSRPTSAPTIPPQPSANSTRAPDIGKTLSTQPPRR 300


>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = +1

Query: 184 TVSSTRKVVS*RT*AQRTKLSPSAGSSLTSAPMESPTP*PTPLT 315
           T S+T    S  T       S +A SS TS P  SPTP P P T
Sbjct: 294 TASTTTTTPSTSTHTTTVTYSTNATSSTTS-PTTSPTPEPEPTT 336


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = +1

Query: 184 TVSSTRKVVS*RT*AQRTKLSPSAGSSLTSAPMESPTP*PTPLT 315
           T S+T    S  T       S +A SS TS P  SPTP P P T
Sbjct: 276 TASTTTTTPSTSTHTTTVTYSTNATSSTTS-PTTSPTPEPEPTT 318


>Z83222-1|CAB05712.1|  410|Caenorhabditis elegans Hypothetical
           protein E01B7.1 protein.
          Length = 410

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +1

Query: 229 QRTKLSPSAGSSLTSAPMES---PTP*PTPLTRKDSSPAVLTSQSLKS 363
           QR  + PS  SS   AP++    PTP   PL  + S P+ L  + + S
Sbjct: 363 QRPMIPPSLPSSTPPAPLKPVAPPTPPIFPLLDRTSKPSTLPERPIVS 410


>Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical
           protein C30H6.4 protein.
          Length = 476

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 23/75 (30%), Positives = 35/75 (46%)
 Frame = +1

Query: 130 TTTTTLAWKDSNMVMRLPTVSSTRKVVS*RT*AQRTKLSPSAGSSLTSAPMESPTP*PTP 309
           TTTTT+    S+      + S+T  VV+  T    T+ + S  +  T+  M++ TP  T 
Sbjct: 268 TTTTTIPSTTSSTT----STSTTTSVVTTTTVTSTTEPTTSTSTPTTTTTMQTTTP-STT 322

Query: 310 LTRKDSSPAVLTSQS 354
            T   +S    TS S
Sbjct: 323 STPTTTSTTTTTSAS 337


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
           protein K08E7.5a protein.
          Length = 1221

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 250 SAGSSLTSAPMESPTP*PTPLTRKDSSPAVLTSQSLKSPYRI 375
           S     TS P  +PTP PT    ++    V  S S K P ++
Sbjct: 66  SGPKKTTSKPATTPTPEPTTTPVEEEKVKVSPSSSTKDPSKL 107


>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
           protein F59A6.5 protein.
          Length = 1286

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 189 YRWKSHNHIGILPRQCCRC 133
           ++WK+  H+G+L  +C  C
Sbjct: 758 HKWKAFRHVGVLSMKCSLC 776


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,560,352
Number of Sequences: 27780
Number of extensions: 204418
Number of successful extensions: 733
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)