Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M18
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    72   5e-15
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   5.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   7.1  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   9.4  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              21   9.4  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 71.7 bits (168), Expect = 5e-15
 Identities = 32/62 (51%), Positives = 41/62 (66%)
 Frame = +3

Query: 171 YETSNGIQHQESGQLKNIGSENEALAVSGQFSYVGPDGVTYSVTYTADEEGFKPSGAHLP 350
           +ETSNGI HQESGQ K + +E   ++  G  SY  PDG   S+TY ADE GF+  G+H+P
Sbjct: 46  FETSNGISHQESGQPKQVDNETPVVS-QGSDSYTAPDGQQVSITYVADENGFQVQGSHIP 104

Query: 351 VA 356
            A
Sbjct: 105 TA 106


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +3

Query: 102 PDGDAQILRYDNDNIGVEGFQYGYETSNGIQHQESGQLKNIGSENE 239
           P  D      DN+ I    F    + S+ + H ++G+LK   S+N+
Sbjct: 406 PANDLLTTEKDNNEIVTAQFLNQLKKSSVLVHTKNGRLKYQISDND 451


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 261  FSYVGPDGVTYSVTYTADEEGFKPSGAHLPV 353
            F+ VG DGV  +VTY   EE    S A + V
Sbjct: 1193 FTRVG-DGVPTTVTYCQTEEDVPGSPADIKV 1222


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 261  FSYVGPDGVTYSVTYTADEEGFKPSGAHLPV 353
            F+ VG DGV  +VTY   EE    S A + V
Sbjct: 1189 FTRVG-DGVPTTVTYCQTEEDVPGSPADIKV 1218


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 118  KSSDTTTTTLAWKDSNM 168
            +S   T  TLAW +SN+
Sbjct: 1202 ESESETVLTLAWSESNV 1218


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -3

Query: 353 DWEVSTAGLESFLVSGVGHGVGDSIGADVRELPADGESFVL*AY 222
           DW +      +F+    G G+    G DVRE  A  E +   AY
Sbjct: 580 DWMMGGNANRNFMP---GRGISKFGGEDVRESEAFAEEYTEEAY 620


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -3

Query: 260 LPADGESFVL*AYVLQLTTFLVLDTVGSLITILESFHAN 144
           +PA  ++  L         F+V  +V S I IL   H N
Sbjct: 284 MPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRN 322


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 244 SPSAGSSLTSAPMESPTP*PTPLTRKDS 327
           +P+ G    S    SP P  TP +RK+S
Sbjct: 379 NPAMGHWQMSCVACSPPPRQTPPSRKES 406


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 436 HRRSDL*YDPDFNKPIYVLVTKKKKKNSR 522
           H   D  Y PD +       T ++KKN +
Sbjct: 6   HNGRDFEYCPDLDNVTMPETTPRRKKNKK 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,771
Number of Sequences: 438
Number of extensions: 2720
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)