Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M16
         (542 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   3.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.2  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 309 HKRHPEQCIGNR*HSRRLQSLQVHEDFRRSHGD*PG 416
           H+RH E   GN  HS   +  + +E   +  G+ PG
Sbjct: 92  HERHFESSFGNNLHS---EKAKFNESKWQDSGESPG 124


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 387 NLHVLVDFEVVGSASDCRY 331
           ++H +VD   VG + DC Y
Sbjct: 657 DVHSIVDDSDVGPSGDCFY 675


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 214 RLCQEVPRAKIALQHNLGLGGAVVITMYRKGFTNVT 321
           +L   V    +  + + GLGG   I +    F N+T
Sbjct: 201 KLINLVVAPSVPFEQDTGLGGLQNIKVLDLSFNNIT 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,016
Number of Sequences: 336
Number of extensions: 2163
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)