Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M16
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M75884-1|AAA03558.1| 289|Homo sapiens sterol carrier protein-2 ... 101 2e-21
M75883-1|AAA03557.1| 547|Homo sapiens sterol carrier protein-X/... 101 2e-21
AL445183-3|CAH72590.1| 547|Homo sapiens sterol carrier protein ... 101 2e-21
U11313-1|AAB41286.1| 547|Homo sapiens sterol carrier protein-X/... 98 2e-20
M55421-1|AAA03559.1| 143|Homo sapiens sterol carrier protein-2 ... 62 1e-09
BC005911-1|AAH05911.1| 143|Homo sapiens sterol carrier protein ... 62 1e-09
S52450-1|AAB24921.1| 143|Homo sapiens sterol carrier protein 2 ... 60 5e-09
AF388184-1|AAL18611.1| 783|Homo sapiens cAMP phosphodiesterase ... 31 2.6
X87176-1|CAA60643.1| 736|Homo sapiens 17beta-hydroxysteroid deh... 30 6.0
BC003098-1|AAH03098.1| 736|Homo sapiens hydroxysteroid (17-beta... 30 6.0
AF057740-1|AAD08652.1| 736|Homo sapiens 17-beta-hydroxysteroid ... 30 6.0
AB208932-1|BAD92169.1| 471|Homo sapiens hydroxysteroid (17-beta... 30 6.0
BC065509-1|AAH65509.1| 1019|Homo sapiens collagen, type VI, alph... 29 8.0
>M75884-1|AAA03558.1| 289|Homo sapiens sterol carrier protein-2
protein.
Length = 289
Score = 101 bits (241), Expect = 2e-21
Identities = 47/110 (42%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Frame = +1
Query: 223 QEVPRAKIALQHNLGLGGAVVITMYRKGF----TNVTPNNVSAI--ASTPDDFKVYKYMK 384
++VP AK+ALQHNLG+GGAVV+T+Y+ GF ++ + + A+ +S D FK K
Sbjct: 121 RQVPGAKVALQHNLGIGGAVVVTLYKMGFPEAASSFRTHQIEAVPTSSASDGFKANLVFK 180
Query: 385 ILEEAMETDQDNLIEKVRGIYGFKVKNGPNGAEGYWVINAKEGKGKVAYN 534
+E+ +E + + ++K+ GI+ FKVK+GP G E WV++ K GKG V N
Sbjct: 181 EIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKGSVLPN 230
>M75883-1|AAA03557.1| 547|Homo sapiens sterol carrier
protein-X/sterol carrier protein-2 protein.
Length = 547
Score = 101 bits (241), Expect = 2e-21
Identities = 47/110 (42%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Frame = +1
Query: 223 QEVPRAKIALQHNLGLGGAVVITMYRKGF----TNVTPNNVSAI--ASTPDDFKVYKYMK 384
++VP AK+ALQHNLG+GGAVV+T+Y+ GF ++ + + A+ +S D FK K
Sbjct: 379 RQVPGAKVALQHNLGIGGAVVVTLYKMGFPEAASSFRTHQIEAVPTSSASDGFKANLVFK 438
Query: 385 ILEEAMETDQDNLIEKVRGIYGFKVKNGPNGAEGYWVINAKEGKGKVAYN 534
+E+ +E + + ++K+ GI+ FKVK+GP G E WV++ K GKG V N
Sbjct: 439 EIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKGSVLPN 488
>AL445183-3|CAH72590.1| 547|Homo sapiens sterol carrier protein 2
protein.
Length = 547
Score = 101 bits (241), Expect = 2e-21
Identities = 47/110 (42%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Frame = +1
Query: 223 QEVPRAKIALQHNLGLGGAVVITMYRKGF----TNVTPNNVSAI--ASTPDDFKVYKYMK 384
++VP AK+ALQHNLG+GGAVV+T+Y+ GF ++ + + A+ +S D FK K
Sbjct: 379 RQVPGAKVALQHNLGIGGAVVVTLYKMGFPEAASSFRTHQIEAVPTSSASDGFKANLVFK 438
Query: 385 ILEEAMETDQDNLIEKVRGIYGFKVKNGPNGAEGYWVINAKEGKGKVAYN 534
+E+ +E + + ++K+ GI+ FKVK+GP G E WV++ K GKG V N
Sbjct: 439 EIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKGSVLPN 488
>U11313-1|AAB41286.1| 547|Homo sapiens sterol carrier
protein-X/sterol carrier protein-2 protein.
Length = 547
Score = 98.3 bits (234), Expect = 2e-20
Identities = 46/110 (41%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Frame = +1
Query: 223 QEVPRAKIALQHNLGLGGAVVITMYRKGF----TNVTPNNVSAI--ASTPDDFKVYKYMK 384
++VP AK+ALQHNL +GGAVV+T+Y+ GF ++ + + A+ +S D FK K
Sbjct: 379 RQVPGAKVALQHNLDIGGAVVVTLYKMGFPEAASSFRTHQIEAVPTSSASDGFKANLVFK 438
Query: 385 ILEEAMETDQDNLIEKVRGIYGFKVKNGPNGAEGYWVINAKEGKGKVAYN 534
+E+ +E + + ++K+ GI+ FKVK+GP G E WV++ K GKG V N
Sbjct: 439 EIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKGSVLPN 488
>M55421-1|AAA03559.1| 143|Homo sapiens sterol carrier protein-2
protein.
Length = 143
Score = 62.1 bits (144), Expect = 1e-09
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +1
Query: 343 ASTPDDFKVYKYMKILEEAMETDQDNLIEKVRGIYGFKVKNGPNGAEGYWVINAKEGKGK 522
+S D FK K +E+ +E + + ++K+ GI+ FKVK+GP G E WV++ K GKG
Sbjct: 21 SSASDGFKANLVFKEIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKGS 80
Query: 523 VAYN 534
V N
Sbjct: 81 VLPN 84
>BC005911-1|AAH05911.1| 143|Homo sapiens sterol carrier protein 2
protein.
Length = 143
Score = 62.1 bits (144), Expect = 1e-09
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +1
Query: 343 ASTPDDFKVYKYMKILEEAMETDQDNLIEKVRGIYGFKVKNGPNGAEGYWVINAKEGKGK 522
+S D FK K +E+ +E + + ++K+ GI+ FKVK+GP G E WV++ K GKG
Sbjct: 21 SSASDGFKANLVFKEIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKGS 80
Query: 523 VAYN 534
V N
Sbjct: 81 VLPN 84
>S52450-1|AAB24921.1| 143|Homo sapiens sterol carrier protein 2
protein.
Length = 143
Score = 60.1 bits (139), Expect = 5e-09
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 343 ASTPDDFKVYKYMKILEEAMETDQDNLIEKVRGIYGFKVKNGPNGAEGYWVINAKEGKGK 522
+S D FK K +E+ +E + + ++K+ GI+ FKVK+GP G E WV++ K G+G
Sbjct: 21 SSASDGFKANLVFKEIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEDTWVVDVKNGQGS 80
Query: 523 VAYN 534
V N
Sbjct: 81 VLPN 84
>AF388184-1|AAL18611.1| 783|Homo sapiens cAMP phosphodiesterase
PDE8A2 protein.
Length = 783
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 367 VYKYMKILEEAME-TDQDNLIEKVRGIYGFKVKNGPNGAEGYWVINAKEGKGKVAY 531
V+ ++ E+A+E T +D I++ +GIY K KNG N + +I GK+ +
Sbjct: 217 VFTALENSEDAIEITSEDRFIQEWQGIYYAKKKNGDNIQQNVKIIPVIGQGGKIRH 272
>X87176-1|CAA60643.1| 736|Homo sapiens 17beta-hydroxysteroid
dehydrogenase protein.
Length = 736
Score = 29.9 bits (64), Expect = 6.0
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +1
Query: 241 KIALQHNLGLGGAVVITMYRKGFTNVTPNNVSAIASTPDDFKVYKYMKILEEAMETDQD- 417
+I Q + G +VI+ + ++ P + ++ A TP + + + EE +D
Sbjct: 583 RIHFQTKVQETGDIVIS---NAYVDLAPTSGTS-AKTPSEGGKLQSTFVFEEIGRRLKDI 638
Query: 418 --NLIEKVRGIYGFKVKNGPN-GAEGYWVINAKEGKGKVAYNG 537
+++KV ++ + + G N GA+ W I+ K G GKV Y G
Sbjct: 639 GPEVVKKVNAVFEWHITKGGNIGAK--WTIDLKSGSGKV-YQG 678
>BC003098-1|AAH03098.1| 736|Homo sapiens hydroxysteroid (17-beta)
dehydrogenase 4 protein.
Length = 736
Score = 29.9 bits (64), Expect = 6.0
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +1
Query: 241 KIALQHNLGLGGAVVITMYRKGFTNVTPNNVSAIASTPDDFKVYKYMKILEEAMETDQD- 417
+I Q + G +VI+ + ++ P + ++ A TP + + + EE +D
Sbjct: 583 RIHFQTKVQETGDIVIS---NAYVDLAPTSGTS-AKTPSEGGKLQSTFVFEEIGRRLKDI 638
Query: 418 --NLIEKVRGIYGFKVKNGPN-GAEGYWVINAKEGKGKVAYNG 537
+++KV ++ + + G N GA+ W I+ K G GKV Y G
Sbjct: 639 GPEVVKKVNAVFEWHITKGGNIGAK--WTIDLKSGSGKV-YQG 678
>AF057740-1|AAD08652.1| 736|Homo sapiens 17-beta-hydroxysteroid
dehydrogenase IV protein.
Length = 736
Score = 29.9 bits (64), Expect = 6.0
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +1
Query: 241 KIALQHNLGLGGAVVITMYRKGFTNVTPNNVSAIASTPDDFKVYKYMKILEEAMETDQD- 417
+I Q + G +VI+ + ++ P + ++ A TP + + + EE +D
Sbjct: 583 RIHFQTKVQETGDIVIS---NAYVDLAPTSGTS-AKTPSEGGKLQSTFVFEEIGRRLKDI 638
Query: 418 --NLIEKVRGIYGFKVKNGPN-GAEGYWVINAKEGKGKVAYNG 537
+++KV ++ + + G N GA+ W I+ K G GKV Y G
Sbjct: 639 GPEVVKKVNAVFEWHITKGGNIGAK--WTIDLKSGSGKV-YQG 678
>AB208932-1|BAD92169.1| 471|Homo sapiens hydroxysteroid (17-beta)
dehydrogenase 4 variant protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.0
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +1
Query: 241 KIALQHNLGLGGAVVITMYRKGFTNVTPNNVSAIASTPDDFKVYKYMKILEEAMETDQD- 417
+I Q + G +VI+ + ++ P + ++ A TP + + + EE +D
Sbjct: 338 RIHFQTKVQETGDIVIS---NAYVDLAPTSGTS-AKTPSEGGKLQSTFVFEEIGRRLKDI 393
Query: 418 --NLIEKVRGIYGFKVKNGPN-GAEGYWVINAKEGKGKVAYNG 537
+++KV ++ + + G N GA+ W I+ K G GKV Y G
Sbjct: 394 GPEVVKKVNAVFEWHITKGGNIGAK--WTIDLKSGSGKV-YQG 433
>BC065509-1|AAH65509.1| 1019|Homo sapiens collagen, type VI, alpha 2
protein.
Length = 1019
Score = 29.5 bits (63), Expect = 8.0
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Frame = +1
Query: 313 NVTPNNVSAIASTPDDFKVYKYMKILEEAMETDQD--NLIEKV--RGIYG--FKVK---- 462
N+ + IASTP + Y +L ++ E DQD N I KV YG +KV
Sbjct: 195 NLKEQGLRDIASTPHELYRNDYATMLPDSTEIDQDTINRIIKVMKHEAYGECYKVSCLEI 254
Query: 463 NGPNGAEGY 489
GP+G +GY
Sbjct: 255 PGPSGPKGY 263
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,235,448
Number of Sequences: 237096
Number of extensions: 1293298
Number of successful extensions: 2526
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2522
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -