Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M16
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 45 4e-05
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 31 0.71
AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase pr... 28 5.0
Z79600-4|CAB01877.1| 213|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z35600-4|CAB54236.1| 137|Caenorhabditis elegans Hypothetical pr... 27 8.7
AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein. 27 8.7
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 27 8.7
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 27 8.7
AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching abn... 27 8.7
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 44.8 bits (101), Expect = 4e-05
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +1
Query: 223 QEVPRAKIALQHNLGLGGAVVITMYRKGFTNVTPNNV 333
++VP K+A+QHN+G+GGA V+ +YR GF + +
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGFPGAAQSKI 412
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 44.8 bits (101), Expect = 4e-05
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +1
Query: 223 QEVPRAKIALQHNLGLGGAVVITMYRKGFTNVTPNNV 333
++VP K+A+QHN+G+GGA V+ +YR GF + +
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGFPGAAQSKI 412
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 445 YGFKVKNGPNGAEGYWVINAKEGKGKVAY 531
YGFK P GYW I K G GKV +
Sbjct: 125 YGFKAAGTPGEIAGYWHIFKKFGSGKVTW 153
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 30.7 bits (66), Expect = 0.71
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 513 PFFRVYHPVALRTVGTVFHFEPVDAADLLDEV 418
P FR Y +A + G VFH E D + +L+ V
Sbjct: 176 PGFRTYEKIAAASFGQVFHLEKSDVSTVLEYV 207
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 30.7 bits (66), Expect = 0.71
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 513 PFFRVYHPVALRTVGTVFHFEPVDAADLLDEV 418
P FR Y +A + G VFH E D + +L+ V
Sbjct: 176 PGFRTYEKIAAASFGQVFHLEKSDVSTVLEYV 207
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 30.7 bits (66), Expect = 0.71
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 513 PFFRVYHPVALRTVGTVFHFEPVDAADLLDEV 418
P FR Y +A + G VFH E D + +L+ V
Sbjct: 176 PGFRTYEKIAAASFGQVFHLEKSDVSTVLEYV 207
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 30.7 bits (66), Expect = 0.71
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 513 PFFRVYHPVALRTVGTVFHFEPVDAADLLDEV 418
P FR Y +A + G VFH E D + +L+ V
Sbjct: 176 PGFRTYEKIAAASFGQVFHLEKSDVSTVLEYV 207
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 30.7 bits (66), Expect = 0.71
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 513 PFFRVYHPVALRTVGTVFHFEPVDAADLLDEV 418
P FR Y +A + G VFH E D + +L+ V
Sbjct: 176 PGFRTYEKIAAASFGQVFHLEKSDVSTVLEYV 207
>AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase
protein 1 protein.
Length = 611
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 507 FRVYHPVALRTVGTVFHFEPVD 442
FR Y P+A R +FH +P D
Sbjct: 142 FRTYAPIAFRYFRNLFHIKPAD 163
>Z79600-4|CAB01877.1| 213|Caenorhabditis elegans Hypothetical
protein F59C6.6 protein.
Length = 213
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 298 RKGFTNVTPNNVSAIASTPDDFKVYKYMKI 387
RK + P NV+ + TPD+ KVY + K+
Sbjct: 63 RKIVQPIPPLNVTVNSKTPDEKKVYNFGKV 92
>Z35600-4|CAB54236.1| 137|Caenorhabditis elegans Hypothetical
protein F37A8.5 protein.
Length = 137
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 333 YIVRGDVCESFAIHCNDDCSS*AQIMLKSYLGAR 232
Y+ GD C S IHC + ++ A+++ KS+ G++
Sbjct: 26 YLPAGDRCYS-CIHCRANLAAHAELISKSFQGSQ 58
>AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein.
Length = 1007
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 38 VT*SKLEESWTLVTIDSLS*TF*SIDILAISDPFNLYHQ 154
VT ++ E+ W+ V + L ++ + AIS P N+ HQ
Sbjct: 759 VTAAETEDEWSSVIVHDLGLSYEYDEHFAISHPSNVIHQ 797
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 417 ILVSLHGFF*NLHVLVDFEVVGSASDCRYIVRGDVCESFAIH 292
+ V+ F + + L FE V SA+ CR + GDVC +H
Sbjct: 120 VYVAYRNFMVDTYRLNPFEYV-SATACRRNLAGDVCSIVRLH 160
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 417 ILVSLHGFF*NLHVLVDFEVVGSASDCRYIVRGDVCESFAIH 292
+ V+ F + + L FE V SA+ CR + GDVC +H
Sbjct: 120 VYVAYRNFMVDTYRLNPFEYV-SATACRRNLAGDVCSIVRLH 160
>AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching
abnormal protein 2 protein.
Length = 1007
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 38 VT*SKLEESWTLVTIDSLS*TF*SIDILAISDPFNLYHQ 154
VT ++ E+ W+ V + L ++ + AIS P N+ HQ
Sbjct: 759 VTAAETEDEWSSVIVHDLGLSYEYDEHFAISHPSNVIHQ 797
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,286,155
Number of Sequences: 27780
Number of extensions: 209383
Number of successful extensions: 525
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -