Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M14
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   2.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   6.1  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -1

Query: 80  PLHRHRPRSHQGVNVPAAPVRQFA 9
           PLH HRP   Q   V A  V Q A
Sbjct: 302 PLHDHRPALAQQRRVAAVQVPQLA 325


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 378 ASAENAAASPSTRAHAPPAPSTHKRAPR 295
           A A  AAA+   R H   +P  H  APR
Sbjct: 97  AGANMAAAANLLRPHPYLSPLFHSAAPR 124


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 361 GGVAVHAGTRTTSAEHAQESAALAQ 287
           G  A  AG    + EH+   A LAQ
Sbjct: 129 GSAAAQAGQPDNAIEHSDYRAKLAQ 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,508
Number of Sequences: 336
Number of extensions: 1594
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)