Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M14
(608 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811 31 0.94
04_04_1277 - 32331648-32331941 31 0.94
07_03_0129 + 13987100-13987572,13988128-13988321,13988474-13989051 30 1.6
02_05_1319 + 35691408-35691779 30 1.6
01_06_1743 + 39601644-39602023,39602301-39602734,39602828-396030... 30 1.6
04_04_0748 + 27738155-27740290 29 2.2
01_01_1112 + 8808544-8808695,8808818-8808961,8809302-8809380,880... 29 2.2
12_01_0541 + 4251931-4254141 27 2.6
12_01_0453 - 3572745-3572918,3573370-3573430,3573646-3573783,357... 29 2.9
11_06_0610 - 25449085-25453284 29 2.9
08_02_0924 - 22660615-22660623,22661035-22661193,22661664-226625... 29 2.9
04_04_0809 - 28236216-28236679,28236776-28236899,28237049-282371... 29 2.9
02_05_0157 - 26353971-26354336,26354645-26354726,26354838-263549... 29 2.9
02_01_0744 + 5548306-5549445 29 2.9
09_04_0465 + 17827224-17827997,17828711-17829024,17829949-178303... 24 3.4
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 29 3.8
02_01_0667 - 4958924-4959523 29 3.8
10_08_0607 + 19168164-19168358,19168594-19168716,19168791-191689... 25 4.4
10_08_0070 + 14637290-14637766,14639215-14639261,14640043-146401... 28 5.0
09_04_0078 + 14379720-14379786,14379903-14379974,14381093-143814... 28 5.0
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 28 5.0
08_02_0581 + 18986084-18986176,18986284-18986668,18986779-189868... 28 5.0
04_04_0709 + 27446105-27446111,27448091-27448632 28 5.0
02_05_0878 + 32437136-32437522 28 5.0
10_08_1037 - 22477358-22478752 28 6.7
10_08_0801 + 20670795-20671730 28 6.7
09_04_0437 - 17587944-17588909 28 6.7
07_03_1551 + 27646445-27647096,27647229-27647374 28 6.7
06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330 28 6.7
04_04_0050 - 22360294-22361804,22362087-22362378,22363367-223634... 28 6.7
04_03_0737 - 19152942-19154930 28 6.7
11_03_0168 - 11099991-11100163,11100242-11100334,11101241-11101442 27 8.8
10_08_0749 - 20282982-20283632,20284081-20284141,20284828-202848... 27 8.8
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 27 8.8
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 27 8.8
08_01_0111 + 850047-850218,850366-850649,851017-851763 27 8.8
02_02_0582 - 11798252-11798908 27 8.8
>08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811
Length = 359
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 449 GVGGDGSPARPSTSRGALLHHHHH 520
G GG SP PS+ LHHHHH
Sbjct: 205 GAGGAISPPPPSSLIPTHLHHHHH 228
>04_04_1277 - 32331648-32331941
Length = 97
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 86 SGACVGGGQRALRPAVSARRRHRAAPGE 169
SGA GGG RAL+PA +A R +A E
Sbjct: 54 SGAKSGGGARALQPAAAAAARRKAQQQE 81
>07_03_0129 + 13987100-13987572,13988128-13988321,13988474-13989051
Length = 414
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 11/60 (18%)
Frame = +2
Query: 395 YCMRSHATPGLNIM*DERGVGGDGSPARPSTSRGA-----------LLHHHHHRSIIFPL 541
+C+ + G + DE G+ G SP R G + HHHHHR I+F L
Sbjct: 306 FCLHQIPSMGSDDEDDEGGMEGHISPVREGEPHGPNPQDNGEEFYKVYHHHHHRCILFIL 365
>02_05_1319 + 35691408-35691779
Length = 123
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 378 ASAENAAASPSTRAHAPPAPSTHKRAPRWHSTR*PALARA 259
A+A+ A + + AH PP P+ +P +TR AL RA
Sbjct: 56 AAADRVAFNATGNAHVPPPPAAAPPSPGTGTTRIDALLRA 95
>01_06_1743 +
39601644-39602023,39602301-39602734,39602828-39603006,
39603636-39603716,39603828-39603914,39604000-39604006,
39604241-39604312,39604712-39604792,39605156-39605262
Length = 475
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Frame = -3
Query: 468 EPSP------PTPRSSHMILSPGVA*DRIQ*RVLRGASAENA---AASPSTRAHA-PPAP 319
EPSP P RS+ PG D I R +S A A++P++ AH+ PP P
Sbjct: 110 EPSPSLDRRDPMSRSARRHRQPGGIGDEILQRASISSSPPRADPFASAPASPAHSLPPNP 169
Query: 318 STHKRAPRWH 289
+ +R R+H
Sbjct: 170 PSSRRKSRFH 179
>04_04_0748 + 27738155-27740290
Length = 711
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = -3
Query: 495 PRDVLGRAGEPSPPTPRSSHMILSPGVA*DRIQ*RVLRGASAENAAASPSTRAHAP 328
PR VL G PSPP S+ A D I V S +AAA+ +TR AP
Sbjct: 44 PRSVLDCRGSPSPPNSTSTLSSSHGSGAADSISTGV-AAVSESSAAAAEATRWAAP 98
>01_01_1112 +
8808544-8808695,8808818-8808961,8809302-8809380,
8809477-8809555,8810338-8810377,8810455-8810589,
8810901-8811038,8811596-8811881
Length = 350
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -3
Query: 501 RAPRDVLGRAGEPSPPTPRSSHM-ILSPGVA*DRIQ*RVL-RGASAENAAASPSTR 340
R+P+ + A SPP PR HM +L G + R+L +G SP+ +
Sbjct: 8 RSPKPMAAAAASASPPQPRPGHMLVLGTGFVGRYVSQRLLAQGWRVSGTCTSPAKK 63
>12_01_0541 + 4251931-4254141
Length = 736
Score = 26.6 bits (56), Expect(2) = 2.6
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 497 ALLHHHHHRS 526
ALLHHHHH S
Sbjct: 354 ALLHHHHHHS 363
Score = 21.0 bits (42), Expect(2) = 2.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 488 SRGALLHHHHH 520
S L HHHHH
Sbjct: 352 SPALLHHHHHH 362
>12_01_0453 -
3572745-3572918,3573370-3573430,3573646-3573783,
3573882-3574003,3574078-3574233,3575337-3575477,
3575643-3576044
Length = 397
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 363 AAASPSTRAHAPPAPSTHKRAPRWHS 286
AA RA APP P+ PRWH+
Sbjct: 41 AAVLRQCRAAAPPPPAPPDAVPRWHA 66
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 462 SPPTPRSSHMILSPGVA*DRIQ*RVLRGASAENAAASPSTRAHAPPAPSTHKRAP 298
SPPTP +SH P V G A + +P ++A PP P + +P
Sbjct: 555 SPPTPTASHS--PPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSP 607
>08_02_0924 -
22660615-22660623,22661035-22661193,22661664-22662539,
22663009-22663119,22663528-22663556,22663690-22663762,
22664804-22665100,22665193-22665345,22665979-22666068,
22667520-22667809,22667860-22668349
Length = 858
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 74 ATACSGACV--GGGQRALRPAVSARRRHRAAP 163
A A +G C GGG L PA ARRRH +P
Sbjct: 532 AVAVAGRCGNGGGGGPGLPPAGDARRRHLPSP 563
>04_04_0809 -
28236216-28236679,28236776-28236899,28237049-28237191,
28237697-28237832,28238413-28238888,28238940-28239024
Length = 475
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 461 DGSPARPSTSRGALLHHHHHRS 526
D SP P+ S G HHHHH S
Sbjct: 435 DASPRVPTRSGGHGHHHHHHSS 456
>02_05_0157 -
26353971-26354336,26354645-26354726,26354838-26354933,
26355365-26356068
Length = 415
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 50 GGFVDGVGATACSGACVGGGQRALRPAVSARRRHRAA 160
GG +DG GA G CVGG A SAR R+A
Sbjct: 180 GGVLDG-GALGAGGDCVGGCCAAAEATRSARTSGRSA 215
>02_01_0744 + 5548306-5549445
Length = 379
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = -2
Query: 409 RSHTVE-SFERSERRKRGGVAVH-AGTRTTSAEHAQESAALAQHALTSAST 263
RS + E S E ERR+RGGV + A T SA A+ +A+ A + +SA+T
Sbjct: 55 RSKSCEPSSEMDERRRRGGVGGNGATTCDDSACGARAAASSASSSSSSATT 105
>09_04_0465 +
17827224-17827997,17828711-17829024,17829949-17830397,
17830641-17830756
Length = 550
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 479 PSTSRGALLHHHHHRSI 529
P TS HHHHH +
Sbjct: 35 PHTSLSLSSHHHHHHRL 51
Score = 23.4 bits (48), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 506 HHHHHRSIIFPL 541
HHHHHR PL
Sbjct: 45 HHHHHRLAPTPL 56
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 382 RSERRKRGGVAVHAGTRTTSAEHAQESAALAQHALTSASTRGLDAAPGSRPTV 224
RS + GG H +TS + ++ A HA TSA++ + S T+
Sbjct: 378 RSYGTRGGGGGSHFSVGSTSGTSSPSTSTTASHATTSAASNAMTTTTSSTHTM 430
>02_01_0667 - 4958924-4959523
Length = 199
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 503 LHHHHHRSIIFPLASI 550
LHHHHH + +P A++
Sbjct: 82 LHHHHHHHLTYPAAAV 97
>10_08_0607 +
19168164-19168358,19168594-19168716,19168791-19168946,
19169129-19169314,19169467-19169583,19169721-19169774,
19169854-19169925,19170430-19170535,19170658-19170754,
19171090-19171184,19172318-19172420,19172699-19172886,
19174928-19175183,19177187-19177325
Length = 628
Score = 25.0 bits (52), Expect(2) = 4.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 482 STSRGALLHHHHH 520
S R A LHHHHH
Sbjct: 3 SRPRVAFLHHHHH 15
Score = 21.8 bits (44), Expect(2) = 4.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 500 LLHHHHHRSIIFPLASI 550
L HHHHH + +A +
Sbjct: 10 LHHHHHHHHHLLAVAVV 26
>10_08_0070 +
14637290-14637766,14639215-14639261,14640043-14640106,
14641022-14641440,14641821-14642055
Length = 413
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = -2
Query: 427 ESGCGVRSHTVESFERSERRKRGGVAVHAGTRTTSAEHAQESAALAQHALTSASTRGLDA 248
E G G + V + R ERR+RG A+ E ESA+ + STR
Sbjct: 63 ERGRGTEGYRVGTGHRDERRRRGRQALQPRAGEGEGEEWPESASAPRAHAGFTSTRDGGG 122
Query: 247 APGSR 233
G R
Sbjct: 123 RRGRR 127
>09_04_0078 +
14379720-14379786,14379903-14379974,14381093-14381497,
14382835-14382911,14383016-14383135,14383227-14383997,
14384933-14385146,14385269-14385735
Length = 730
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 461 DGSPARPSTSRGALLHHHHHRSIIFPLAS 547
D S +T R + HHHHR++ P AS
Sbjct: 387 DASEGSKNTPRSSARGHHHHRTMENPTAS 415
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -3
Query: 465 PSPPTPRSSHMILSPGVA*DRIQ*RVLRGASAENAAASPSTRAHAPPAPSTHKRAP 298
P PP+PR H P Q L A+ + T+ HAPPAP + + +P
Sbjct: 500 PEPPSPR--HPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSP 553
>08_02_0581 +
18986084-18986176,18986284-18986668,18986779-18986861,
18986966-18987110,18987823-18987951,18988047-18988171,
18988261-18988419,18988503-18988665,18988750-18988875,
18989110-18989471,18989572-18989772,18989873-18989982,
18990079-18990163,18990298-18990426,18990505-18990610,
18990688-18990776,18990885-18991184
Length = 929
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 373 RRKRGGVAVHAGTRTTSAEHAQESAALAQHALTSAS 266
+ + GG V T TTS+EH QE L QH SA+
Sbjct: 832 KARYGGTYVF--TMTTSSEHEQEVKQLVQHLSPSAN 865
>04_04_0709 + 27446105-27446111,27448091-27448632
Length = 182
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -2
Query: 418 CGVRSHTVESFERSERRKRGGVAVHAGTRTTSA-EHAQESAA 296
CG +HTV++ R+ GG RT A H +E A
Sbjct: 63 CGAHAHTVDALSRNRELLAGGAGCGTHARTIDALRHDREPLA 104
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = -2
Query: 424 SGCGVRSHTVESFERSERRKRGGVAVHAG----TRTTSAEHAQESAALAQHALTSASTRG 257
+GCG + T+++ GG G T+A+ E A A+ AST
Sbjct: 84 AGCGTHARTIDALRHDREPLAGGTGAGVGEEDPNTDTAADEEVEHEGAALAAVIGASTTS 143
Query: 256 LDAAPGSR 233
A SR
Sbjct: 144 TYLASSSR 151
>02_05_0878 + 32437136-32437522
Length = 128
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 449 GVGGDGSPARPSTSRGALLHHHHHRS 526
G GG SP R G+ HHHHH S
Sbjct: 94 GGGGSSSPHRVHAGGGS--HHHHHYS 117
>10_08_1037 - 22477358-22478752
Length = 464
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 113 AARRQRMRRSTPLHRHRPRSHQGVNVPAAPVRQFARH 3
AA + P+ RH P +H+G +PA+P + +H
Sbjct: 213 AAAAGLQHQQEPVPRHSPAAHRGDPLPASPPQPQHQH 249
>10_08_0801 + 20670795-20671730
Length = 311
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 378 ASAENAA-ASPSTRAHAPPAPSTHKRAPRW 292
ASAE+AA A+PS R P +P+ +P W
Sbjct: 214 ASAESAASAAPSPRTPTPYSPARTPASPMW 243
>09_04_0437 - 17587944-17588909
Length = 321
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 458 GDGSPARPSTSRGALLHHHHHRSII 532
G+G PA G HHHHH ++
Sbjct: 34 GEGPPAPALAFPGGGAHHHHHHHLL 58
>07_03_1551 + 27646445-27647096,27647229-27647374
Length = 265
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 474 AGEPSPPTPRSSHMILSPGVA*DRIQ*RVLRGASAENAAASPSTRAHAPPAP 319
A PSPP R+S + L+P L + P+T A APP P
Sbjct: 4 AASPSPPPSRASPLRLNPAA--------FLLRTTTTTTTVQPTTSADAPPPP 47
>06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330
Length = 426
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = +2
Query: 464 GSPARPSTSR--GALLHHHHH 520
G+P S++ GA+LHHHHH
Sbjct: 335 GAPPHESSAPQIGAMLHHHHH 355
>04_04_0050 -
22360294-22361804,22362087-22362378,22363367-22363420,
22363627-22363718,22364713-22364915,22365892-22366133,
22366205-22366330,22366800-22366907,22367394-22367457,
22367543-22367681,22367867-22368038,22368198-22368482
Length = 1095
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 74 ATACSGACVGGGQRALRPAVSARRRHRAAPGE 169
A+A + A GG +R RP+V+A + RA GE
Sbjct: 41 ASASASAGAGGRERERRPSVAAGQACRAKKGE 72
>04_03_0737 - 19152942-19154930
Length = 662
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 378 ASAENAAASPSTRAHAPPAPSTHKRAPRWHSTR 280
A+A A A+P R PP H+ R H+TR
Sbjct: 10 AAAAAATAAPEPRGIRPPRAPVHRLRLRHHATR 42
>11_03_0168 - 11099991-11100163,11100242-11100334,11101241-11101442
Length = 155
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = -2
Query: 424 SGCGVRSHTVESFERSERRKRG----GVAVHAGTRTTSAEHAQESAALAQHALTSASTRG 257
+GCG V ER E G G+ G R+ SAE + AA A+H+ + S G
Sbjct: 93 AGCGT---AVAGAERGEDEWAGCLPVGLVSETGQRSQSAELVRAMAAGAEHSKNAGSAAG 149
Query: 256 LD 251
+
Sbjct: 150 AE 151
>10_08_0749 -
20282982-20283632,20284081-20284141,20284828-20284872,
20285293-20285672,20286382-20287050
Length = 601
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 449 GVGGDGSPARPSTSRGAL--LHHHHHRSIIFPLA 544
GV G+ P+ G L LHHH HR PL+
Sbjct: 68 GVDDGGATTLPTVHFGGLGELHHHQHRQSQAPLS 101
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +2
Query: 464 GSPARPSTSR--GALLHHHHHRSIIFPLASI 550
G PA + + AL HHHHH P A +
Sbjct: 137 GQPAAAAAAHPVAALGHHHHHHQWTLPFAGV 167
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 366 NAAASPSTRAHAPPAPSTHKRAP 298
++ A+PS PP PS H+RAP
Sbjct: 58 SSIAAPSPSRAPPPPPSHHERAP 80
>08_01_0111 + 850047-850218,850366-850649,851017-851763
Length = 400
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 455 GGDGSPARPSTSRGALLHHHHHRS 526
GGD + + + + LL HHHHR+
Sbjct: 291 GGDAASSAAAAAADHLLLHHHHRT 314
>02_02_0582 - 11798252-11798908
Length = 218
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 50 GGFVDGVGATACSGACVGGG 109
GGF G G T GA VGGG
Sbjct: 74 GGFGGGAGTTRGGGASVGGG 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,465,938
Number of Sequences: 37544
Number of extensions: 255400
Number of successful extensions: 2422
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2364
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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