Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M14
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024826-6|AAF60801.1|  379|Caenorhabditis elegans Hypothetical ...    30   1.1  
AC006831-1|AAF39995.1|  558|Caenorhabditis elegans Hypothetical ...    23   4.0  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U67949-2|AAB07560.2|  368|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U28993-3|AAT81196.1|  635|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U28993-2|AAK31497.1|  720|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>AC024826-6|AAF60801.1|  379|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.9 protein.
          Length = 379

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 366 NAAASPSTRAHAPPAPSTHKRAPRWHSTR 280
           +A  SP  RA APPAP T +  P    TR
Sbjct: 339 SAPVSPQHRAPAPPAPQTARAPPETSPTR 367


>AC006831-1|AAF39995.1|  558|Caenorhabditis elegans Hypothetical
           protein ZK121.2 protein.
          Length = 558

 Score = 23.4 bits (48), Expect(2) = 4.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 470 PARPSTSRGALLHHHHHRSII 532
           P    T    ++HHHHH + I
Sbjct: 384 PVVCGTPPSVMVHHHHHHAHI 404



 Score = 23.4 bits (48), Expect(2) = 4.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 506 HHHHHRSIIFPLASISMG*TLYE 574
           HHHHH  I  P  S   G  ++E
Sbjct: 397 HHHHHAHIQQPPTSNYTGYQVFE 419


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 25/81 (30%), Positives = 34/81 (41%)
 Frame = -3

Query: 501 RAPRDVLGRAGEPSPPTPRSSHMILSPGVA*DRIQ*RVLRGASAENAAASPSTRAHAPPA 322
           +A   V  RA   SP   RS     SP  A    + R     S   A     +R+ +PPA
Sbjct: 288 KAIASVAARAKSGSPRRRRSPSASKSPPPA----RRRRSPSQSKSPAPKRAKSRSKSPPA 343

Query: 321 PSTHKRAPRWHSTR*PALARA 259
           P+  +R+P    +  PA  RA
Sbjct: 344 PARRRRSPSASKSPPPAPKRA 364


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 20/112 (17%), Positives = 33/112 (29%)
 Frame = -2

Query: 337 TRTTSAEHAQESAALAQHALTSASTRGLDAAPGSRPTVPVIHTXXXXXXXXXXXXXXXXX 158
           T TT+      +        T+  T     A  +  T     T                 
Sbjct: 218 TTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPT 277

Query: 157 XAVPATSTNSRAQSTLPAANACAGARRCTDTVHEATRESTSPRLQFDSSPVT 2
                T+T +   +T     +     + T T    T  +T+P+  FD+S  T
Sbjct: 278 TTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTTTTTTPKTPFDTSKCT 329


>U67949-2|AAB07560.2|  368|Caenorhabditis elegans Hypothetical
           protein F55A4.2 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 108 PPPTHAPEHAVAPTPST 58
           PPPTH P    AP P T
Sbjct: 21  PPPTHPPAPTAAPRPDT 37


>U28993-3|AAT81196.1|  635|Caenorhabditis elegans Hypothetical
           protein F22D3.2b protein.
          Length = 635

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 408 DRIQ*RVLRGASAENAAASPSTRAHAPPAPSTHKRAPR 295
           +R++   LR  S E +AAS       PP P +    PR
Sbjct: 130 ERVKNACLRSLSCEVSAASKKNPVQPPPPPLSRSTTPR 167


>U28993-2|AAK31497.1|  720|Caenorhabditis elegans Hypothetical
           protein F22D3.2a protein.
          Length = 720

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 408 DRIQ*RVLRGASAENAAASPSTRAHAPPAPSTHKRAPR 295
           +R++   LR  S E +AAS       PP P +    PR
Sbjct: 130 ERVKNACLRSLSCEVSAASKKNPVQPPPPPLSRSTTPR 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,069,827
Number of Sequences: 27780
Number of extensions: 163637
Number of successful extensions: 1032
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)