Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M14
         (608 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.14 
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   3.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 148 PATSTNSRAQSTLPAANACAGARRCTDTVHEATRESTS 35
           PAT T + A +TLPAA+A  G    T +   AT  +T+
Sbjct: 216 PATVTTTGATTTLPAASA-TGTGPATPSAVVATSNATA 252


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 486 VLGRAGEPSPPTPRSSHMILSPG 418
           +LG  G  + PTP+S  +I  PG
Sbjct: 78  ILGFLGRLANPTPQSITLISFPG 100


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 360 AASPSTRAHAPPAPSTHKRAPRWHST 283
           A SPS++A A   P T       HST
Sbjct: 680 ARSPSSQAQASQCPQTASLLSSTHST 705


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 474 AGEPSPPTPRSSHM 433
           AG P PP P  S+M
Sbjct: 413 AGAPMPPIPNMSNM 426


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 506 HHHHHRS 526
           HHHHH++
Sbjct: 352 HHHHHQT 358


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 515 HHRSIIFPLASISMG*TLYENFCTT 589
           HH    +P AS++     Y  FC+T
Sbjct: 432 HHFQCRYPNASVTPYNKNYTKFCST 456


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,315
Number of Sequences: 438
Number of extensions: 1877
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)