Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M12
         (403 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   182   4e-48
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   0.59 
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   1.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   7.3  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  182 bits (443), Expect = 4e-48
 Identities = 84/134 (62%), Positives = 100/134 (74%)
 Frame = +1

Query: 1   YIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXX 180
           YIRIQR +A+LQ+RLK+PPPINQFTQTLDK TA+ + K  +KYRPE              
Sbjct: 66  YIRIQRHRAILQKRLKIPPPINQFTQTLDKPTAQQVMKCWKKYRPENPIARVQRLKAKAE 125

Query: 181 XXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRTMGV 360
                 +EPP KR N LR G N+V K+VE+KKAQLV+IAHDVDPIELV++LPALCR MGV
Sbjct: 126 AKAAGKEEPPSKRANQLRQGINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGV 185

Query: 361 PYCIVKGKSRLGAL 402
           PYCI+KGK+RLG L
Sbjct: 186 PYCIIKGKARLGTL 199


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 0.59
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 3   YSHPASKGCVTASSQSAAANQPVHP 77
           + HP   G + A SQ     QPVHP
Sbjct: 165 HHHPGLTGLMQAPSQQQQHLQPVHP 189


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = +1

Query: 37  RRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 138
           R+L++     + T+T+++  A+ +   L ++RPE
Sbjct: 229 RKLRLKVCSRELTETVERVAAEAINSKLHEHRPE 262


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 53  RRQSTSSPRH*IKPQPKVCSRSWRNTGQKLRQS 151
           RR    SP H  KP+ +   R W+  GQ L +S
Sbjct: 229 RRFHRQSPAHRRKPRWRRAGRRWK-VGQFLPES 260


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 360 DSHRTAKRWQEEH 322
           D  R AKRW E+H
Sbjct: 671 DLARKAKRWDEKH 683


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,163
Number of Sequences: 2352
Number of extensions: 6442
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)