Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M10
(311 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0176 + 12637287-12637376,12638108-12638280,12638631-126387... 33 0.062
02_05_0508 - 29623173-29623301,29623410-29623575,29623691-296237... 31 0.14
05_04_0091 + 17839118-17839303,17840876-17840923,17841381-178415... 29 0.58
03_05_0674 + 26619579-26619658,26620020-26620746,26620999-266214... 28 1.8
05_04_0006 - 17072576-17072950,17072969-17073179,17075807-17075949 27 3.1
04_01_0229 - 2897484-2900402 27 3.1
01_06_1285 - 35995943-35996087,35996909-35997697,35997802-359978... 27 4.1
06_02_0096 - 11683368-11684581,11684705-11684773,11685356-116854... 26 5.4
11_03_0162 - 10956997-10957323,10957390-10957568,10957823-109579... 26 7.2
06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632... 26 7.2
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 26 7.2
05_02_0065 - 6276439-6276462,6276716-6276781,6277035-6277100,627... 26 7.2
03_01_0371 + 2883418-2883967,2884097-2884176,2886283-2886339,288... 26 7.2
02_03_0117 + 15446011-15446117,15446813-15447129,15447529-154475... 26 7.2
01_03_0276 - 14489847-14489921,14490144-14490240,14491480-144915... 26 7.2
11_01_0347 + 2601170-2602019,2602245-2603353 25 9.5
09_03_0041 + 11826788-11828002,11828101-11828563,11828668-118287... 25 9.5
>06_02_0176 +
12637287-12637376,12638108-12638280,12638631-12638743,
12639125-12639313,12639397-12639464,12639601-12639684,
12639791-12639844,12640445-12640525,12640615-12640708,
12640830-12640903,12640976-12641086,12641299-12641355,
12641458-12641562,12641656-12641772,12641900-12642003,
12642229-12642394,12642513-12642641
Length = 602
Score = 32.7 bits (71), Expect = 0.062
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 192 VRISSGYADVGVLVVGFNVIGHFFPTTFHHPLSH 293
V++ G A + V G +VI H FP T+ PL+H
Sbjct: 34 VKVEYGDAAIAADVAGAHVISHAFPHTYGQPLAH 67
>02_05_0508 -
29623173-29623301,29623410-29623575,29623691-29623794,
29623888-29624004,29624315-29624371,29624475-29624519,
29624610-29624720,29624788-29624861,29624967-29625060,
29625744-29625797,29626040-29626123,29626244-29626311,
29626400-29626588,29627193-29627305,29627525-29627697,
29628444-29628533
Length = 555
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 192 VRISSGYADVGVLVVGFNVIGHFFPTTFHHPLSH 293
VR+ G A + G +VI H FP T+ PL+H
Sbjct: 34 VRVEYGDAAIAADPAGAHVISHAFPHTYGQPLAH 67
>05_04_0091 +
17839118-17839303,17840876-17840923,17841381-17841526,
17841616-17841664,17842260-17842316,17842460-17842627,
17842950-17843011,17843103-17843190,17843277-17843388,
17843472-17843548,17843622-17843759,17844424-17844588,
17844667-17844780,17845026-17845122,17845242-17845390
Length = 551
Score = 29.5 bits (63), Expect = 0.58
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -1
Query: 293 VTEGMMESSREEMTNHVETDNQDADIGVAR-GDTD-KERQISTNDNWMNKVEATTYAVDL 120
+T+G++ +E + V + I + G+ D K+ +I DN ++E++T +
Sbjct: 431 ITDGVLTDIQETKDSIVRASDLPLSILIVGVGNADFKQMEILDGDNG-KRLESSTGRIAT 489
Query: 119 KDEVEFVPIR 90
+D V+FVP+R
Sbjct: 490 RDIVQFVPMR 499
>03_05_0674 +
26619579-26619658,26620020-26620746,26620999-26621486,
26621746-26621902,26621975-26621998
Length = 491
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 173 TNDNWMNKVEATTYAVDLKDEVEFVPIRY 87
++DN K+ TT V L + V F PIRY
Sbjct: 175 SSDNTAIKIALTTLIVTLPEAVRFRPIRY 203
>05_04_0006 - 17072576-17072950,17072969-17073179,17075807-17075949
Length = 242
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -1
Query: 251 NHVETDNQDADIGVARG--DTDKERQISTNDNWMNKVEATTYA 129
NHVE DNQ+ D + RG +T Q+++ ++ + +A T A
Sbjct: 163 NHVEDDNQEGDGSMGRGGEETLTYAQLASGVRYLLQEKAYTRA 205
>04_01_0229 - 2897484-2900402
Length = 972
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 308 TTEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKE 186
TT + EG+M+ EE+T + N + + G D KE
Sbjct: 424 TTTEEIPEGVMKLVFEELTRVILRTNMEGNSGTGNKDMSKE 464
>01_06_1285 -
35995943-35996087,35996909-35997697,35997802-35997871,
35997989-35998220
Length = 411
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = -1
Query: 308 TTEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYA 129
TTE+P + +E + + + + ++ R S N + + KVE +T A
Sbjct: 315 TTEIPNYRQKIVEDKEYFSGSLVETKRSSPADTSQDIAVLRRSSSYNADRVQKVEPSTEA 374
Query: 128 VDLKD 114
VD+ D
Sbjct: 375 VDMHD 379
>06_02_0096 -
11683368-11684581,11684705-11684773,11685356-11685412,
11685553-11685609,11685758-11685817,11686770-11686893
Length = 526
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -1
Query: 311 ETTEVPVTEGMMESSREEMTNHVETDNQDAD 219
+T +V E + + +E+T HV+ +N+D++
Sbjct: 72 QTLDVAKLEDSVVGTSDELTGHVDANNEDSN 102
>11_03_0162 -
10956997-10957323,10957390-10957568,10957823-10957922,
10959333-10959397,10959480-10959572,10961062-10961607,
10961627-10961678,10961753-10961884,10963049-10963210,
10963532-10963582
Length = 568
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = -1
Query: 248 HVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVD 123
+ + AD+ + TD+ R++ TND AT + ++
Sbjct: 272 NASSQGSGADLSASGNGTDQWRRVPTNDRTRVSASATNFGLE 313
>06_03_0640 -
23059473-23060489,23060592-23060651,23063163-23063283,
23063476-23065496
Length = 1072
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = -1
Query: 290 TEGMMESSREEM-TNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKD 114
TEG ++ + + T E+DN + D + G + + +N + DLKD
Sbjct: 453 TEGQTKTDDKSVHTEEKESDNSEQDGVIVTGGNNMPSNLEHTENEKTDLMQELMVDDLKD 512
Query: 113 EVEFVPI 93
PI
Sbjct: 513 TENLPPI 519
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 236 DNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKDEV 108
D++D D A D+DKE+ +N + ++ + T+ + D E+
Sbjct: 484 DSEDGDFDPAGPDSDKEQNDESNSDQSDESDFTSDSDDFCAEI 526
>05_02_0065 -
6276439-6276462,6276716-6276781,6277035-6277100,
6277384-6277449,6277698-6277745,6278233-6278292,
6278418-6278483,6278569-6278652,6278736-6278801,
6278878-6279036,6279106-6279222,6279305-6279397,
6279697-6279900,6280013-6280161,6280234-6280492
Length = 508
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -1
Query: 272 SSREEMTNHVETDNQDA--DIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKDE 111
S +E + + V+ N+D D+G A DTD + ++ + N+ ++++DE
Sbjct: 35 SEQETICSDVQEGNEDTNDDVGEANEDTDDDASMNAGEG--NEESDDDVEINVRDE 88
>03_01_0371 +
2883418-2883967,2884097-2884176,2886283-2886339,
2887152-2887207,2888006-2888079,2889511-2889798,
2890043-2890120,2890359-2890882,2891315-2891438,
2891619-2891767,2891983-2892137,2892477-2892682,
2892768-2892901,2892983-2893284,2893514-2893617,
2893858-2893928
Length = 983
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 311 ETTEVPVT--EGMM-ESSREEMTNHVETDNQDADIGVARGDTDKERQIST 171
++ + PVT EG++ + +TDN D DIG D D + + T
Sbjct: 302 DSLQKPVTTLEGLIADDPYHPSPEDEDTDNGDVDIGGDSADADSKNSVPT 351
>02_03_0117 +
15446011-15446117,15446813-15447129,15447529-15447599,
15448382-15448573
Length = 228
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 233 NQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKDEVEFVPI 93
N DI + GD+D E T ++ ++A T K EFVPI
Sbjct: 85 NNGEDIEMGGGDSDSEHVDLTYEHVNPVIQALTRKFRSKAWKEFVPI 131
>01_03_0276 -
14489847-14489921,14490144-14490240,14491480-14491546,
14491748-14491877,14491995-14492152,14493004-14493235,
14493760-14493895,14493982-14494085,14495709-14495987
Length = 425
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 35 YDIRKKKEDFK*KSISLNNVLVRIPLRLSS 124
Y KKE+ + IS N L R+P+RLS+
Sbjct: 259 YFWENKKEEQQITQISRNETLSRLPVRLST 288
>11_01_0347 + 2601170-2602019,2602245-2603353
Length = 652
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 266 REEMTNHVETDNQDADIGVARGDT-DKERQ-ISTNDNWMNKVEATTYAVDLKD 114
REE+ V + D D+G A T K R +S M K E LKD
Sbjct: 460 REEIMEEVVVETDDKDLGFAEQSTFGKSRSVVSVTPELMQKEEQMKQLQILKD 512
>09_03_0041 +
11826788-11828002,11828101-11828563,11828668-11828798,
11829227-11829577,11829723-11829879,11829968-11830260,
11830367-11830426,11830530-11830619,11830774-11830857
Length = 947
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = -1
Query: 296 PVTEGMMESSREEMTNHVETDNQDAD--------IGVARGDTDKERQISTNDNWMNKVEA 141
PV+ M E MTN + +D + D +G+ GD D++ + + + +++
Sbjct: 181 PVSAPWMHGEEEPMTNQLVSDEEGLDGDGASEDEMGLVDGDGDEDEDLGSEEETLSESSD 240
Query: 140 TTYAVD 123
++ D
Sbjct: 241 GEFSED 246
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,807,325
Number of Sequences: 37544
Number of extensions: 115848
Number of successful extensions: 367
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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