Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M10
(311 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56250.2 68418.m07020 expressed protein 32 0.093
At5g56250.1 68418.m07019 expressed protein 32 0.093
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 31 0.22
At5g34895.1 68418.m04113 hypothetical protein similar to At2g049... 28 1.1
At3g30450.1 68416.m03852 hypothetical protein similar to At2g049... 28 1.1
At2g04970.1 68415.m00518 hypothetical protein similar to At2g152... 28 1.1
At3g25980.1 68416.m03237 mitotic spindle checkpoint protein, put... 28 1.5
At3g21175.2 68416.m02676 zinc finger (GATA type) family protein ... 28 1.5
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 27 2.0
At1g55430.1 68414.m06340 DC1 domain-containing protein contains ... 27 3.5
At5g46760.1 68418.m05760 basic helix-loop-helix (bHLH) family pr... 26 4.6
At2g22795.1 68415.m02704 expressed protein 26 4.6
At5g15170.1 68418.m01777 tyrosyl-DNA phosphodiesterase-related s... 26 6.1
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 26 6.1
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 26 6.1
At4g21460.1 68417.m03104 expressed protein 26 6.1
At3g18240.2 68416.m02321 expressed protein 26 6.1
At3g18240.1 68416.m02320 expressed protein 26 6.1
At3g14900.1 68416.m01884 expressed protein 25 8.1
At1g08860.1 68414.m00987 copine, putative Similar to BONZAI1 [Ar... 25 8.1
>At5g56250.2 68418.m07020 expressed protein
Length = 811
Score = 31.9 bits (69), Expect = 0.093
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 296 PVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNW 159
PV G+M+ + M ++N+D DIG + +ER++S D W
Sbjct: 493 PVARGVMKFKKARMDF---SENEDEDIGKWESEMTQERELSDYDGW 535
>At5g56250.1 68418.m07019 expressed protein
Length = 811
Score = 31.9 bits (69), Expect = 0.093
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 296 PVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNW 159
PV G+M+ + M ++N+D DIG + +ER++S D W
Sbjct: 493 PVARGVMKFKKARMDF---SENEDEDIGKWESEMTQERELSDYDGW 535
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 30.7 bits (66), Expect = 0.22
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -1
Query: 311 ETTEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTY 132
ETTEVP E + EE H ET++Q+A + + D D + ++ KVE T
Sbjct: 653 ETTEVPKEENV-----EEHDEHDETEDQEAYV-ILSDDEDNGTAPTEKESQPQKVETTEV 706
Query: 131 AVDLKDEVEFV 99
+ K + E V
Sbjct: 707 PGETKKDDEDV 717
>At5g34895.1 68418.m04113 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At3g47270, At2g02200
Length = 490
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 311 ETTEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTY 132
ETTEVP E + EE H ET++Q+A + + D D + ++ K E T
Sbjct: 296 ETTEVPKEENV-----EEHDEHDETEDQEAYV-ILSDDEDNGTAPTEKESQPQKEETTEV 349
Query: 131 AVDLKDEVEFV 99
+ K + E V
Sbjct: 350 PRETKKDDEDV 360
>At3g30450.1 68416.m03852 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 800
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 311 ETTEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTY 132
ETTEVP E + EE H ET++Q+A + + D D + ++ K E T
Sbjct: 606 ETTEVPKEENV-----EEHDEHDETEDQEAYV-ILSDDEDNGTAPTEKESQPQKEETTEV 659
Query: 131 AVDLKDEVEFV 99
+ K + E V
Sbjct: 660 PRETKKDDEDV 670
>At2g04970.1 68415.m00518 hypothetical protein similar to At2g15200,
At1g32830, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 808
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 311 ETTEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTY 132
ETTEVP E + EE H ET++Q+A + + D D + ++ K E T
Sbjct: 614 ETTEVPKEENV-----EEHDEHDETEDQEAYV-ILSDDEDNGTAPTEKESQPQKEETTEV 667
Query: 131 AVDLKDEVEFV 99
+ K + E V
Sbjct: 668 PRETKKDDEDV 678
>At3g25980.1 68416.m03237 mitotic spindle checkpoint protein,
putative (MAD2) identical to Swiss-Prot:Q9LU93 mitotic
spindle checkpoint protein MAD2 [Arabidopsis thaliana]
Length = 209
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -1
Query: 263 EEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKDEVEFVPIRY 87
E +ETDN+ D GV+R +DKE + TY L + F + Y
Sbjct: 99 ERWNFRIETDNEVVDKGVSREKSDKEIMREIQAIMRQVASSVTYLPCLDETCVFDVLAY 157
>At3g21175.2 68416.m02676 zinc finger (GATA type) family protein
similar to zinc finger protein ZIM gi:8918533 from
[Arabidopsis thaliana]; contains Pfam PF00320: GATA zinc
finger
Length = 295
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 174 GYLPFFVRISSGYADVGVLVVGFNVIGHFFPTTFHHPLSHRNFRGL 311
G + F R+S +L++G + H PTT P H+N RGL
Sbjct: 86 GQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSP--HQNNRGL 129
>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At5g34895, At2g02200
Length = 671
Score = 27.5 bits (58), Expect = 2.0
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 311 ETTEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTY 132
ETTEVP E + EE H ET++Q+A + + D D + ++ K E T
Sbjct: 477 ETTEVPKEENV-----EEHDEHDETEDQEAYV-ILLDDEDNGTAPTEKESQPQKEEITEV 530
Query: 131 AVDLKDEVEFV 99
+ K + E V
Sbjct: 531 PRETKKDDEDV 541
>At1g55430.1 68414.m06340 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 657
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -1
Query: 275 ESSREEMTNHV-ETDNQDA-DIGVARGDTDKERQISTNDN 162
E S EE+ N V + D++DA D VA D D++ + +DN
Sbjct: 116 EESSEELINEVVDYDHEDAGDDAVANEDDDEDAVPNDDDN 155
>At5g46760.1 68418.m05760 basic helix-loop-helix (bHLH) family
protein
Length = 592
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = -1
Query: 275 ESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVE 144
ES +EE+ ++ +++ + G G KER+ S D+ + +E
Sbjct: 468 ESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIE 511
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 290 TEGMMESSREEMTNHVETDNQDADIGVARGDT-DKERQISTNDNWMNKVEATTYAVDLKD 114
T+ ESS +E T ET+ +D + ++ +T DKE + + ++ E+ + K+
Sbjct: 508 TKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKE 567
Query: 113 EVE 105
+ E
Sbjct: 568 KEE 570
>At5g15170.1 68418.m01777 tyrosyl-DNA phosphodiesterase-related
similar to Chain A, Crystal Structure Of Human
Tyrosyl-Dna Phosphodiesterase (Tdp1) [Homo sapiens]
GI:20150581
Length = 605
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +2
Query: 260 LPYYFPSSPQSPE-LPWS 310
+PY P P SPE +PWS
Sbjct: 571 VPYQLPPKPYSPEDVPWS 588
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 25.8 bits (54), Expect = 6.1
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = -1
Query: 305 TEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAV 126
TEVPV E E T+ E +DA+ + D E++ T KV+ T Y
Sbjct: 290 TEVPVEEDESADEETETTSTEEEKEEDAE------EEDGEKKQKT-----KKVKETVYEW 338
Query: 125 DLKDEVEFVPIR 90
+L ++V+ + +R
Sbjct: 339 ELLNDVKAIWLR 350
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 25.8 bits (54), Expect = 6.1
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = -1
Query: 305 TEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAV 126
TEVPV E E T+ E +DA+ + D E++ T KV+ T Y
Sbjct: 290 TEVPVEEDESADEETETTSTEEEKEEDAE------EEDGEKKQKT-----KKVKETVYEW 338
Query: 125 DLKDEVEFVPIR 90
+L ++V+ + +R
Sbjct: 339 ELLNDVKAIWLR 350
>At4g21460.1 68417.m03104 expressed protein
Length = 415
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -1
Query: 233 NQDADIGVARGDTDK---ERQISTNDNWMNKVEATTYAVDLKDE 111
N+DA GV + ++ T+D M K+E+ + D+KDE
Sbjct: 90 NEDALPGVIEALLQRRLVDKHAETDDELMEKIESLPFKDDVKDE 133
>At3g18240.2 68416.m02321 expressed protein
Length = 419
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -1
Query: 311 ETTEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDK---ERQISTNDNWMNKVEA 141
E ++ V + + + + + N+DA GV + ++ T+D + K+E+
Sbjct: 68 EKKDLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKIES 127
Query: 140 TTYAVDLKDE 111
+ D+KDE
Sbjct: 128 LPFKDDVKDE 137
>At3g18240.1 68416.m02320 expressed protein
Length = 419
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -1
Query: 311 ETTEVPVTEGMMESSREEMTNHVETDNQDADIGVARGDTDK---ERQISTNDNWMNKVEA 141
E ++ V + + + + + N+DA GV + ++ T+D + K+E+
Sbjct: 68 EKKDLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKIES 127
Query: 140 TTYAVDLKDE 111
+ D+KDE
Sbjct: 128 LPFKDDVKDE 137
>At3g14900.1 68416.m01884 expressed protein
Length = 611
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -1
Query: 242 ETDNQDADIGVARGDTDKERQISTNDNWMNKVEATTYAVDLKDEVE 105
E DN D D D + E ++ +DN + VE L+DE+E
Sbjct: 438 EADNDDDDDDDDDDDGEVE-EVDDDDNMVVDVEGNVEEDSLEDEIE 482
>At1g08860.1 68414.m00987 copine, putative Similar to BONZAI1
[Arabidopsis thaliana] GI:15487382; contains Pfam
profile PF00168: C2 domain
Length = 589
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 212 VARGDTD-KERQISTNDNWMNKVEATTYAVDLKDEVEFVPIR 90
V G+TD K+ ++ DN ++E++T + +D V+FVP++
Sbjct: 511 VGVGNTDFKQMEMLDADNG-RRLESSTGRIATRDIVQFVPMK 551
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,780,016
Number of Sequences: 28952
Number of extensions: 101975
Number of successful extensions: 368
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 331449360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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