Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M09
         (103 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26249| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   2e-04
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   5.6  

>SB_26249| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 171

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 4/38 (10%)
 Frame = +1

Query: 1   ADQTEKAFQKQATVFLNRKGGM----KRKDMRHSKNVG 102
           A+QTE+A+QKQA +F NRK  +    K+KD+R  +NVG
Sbjct: 2   AEQTERAYQKQAPIFQNRKRVLGQVTKKKDLRFVRNVG 39


>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 639

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 54  QGGHEKEGYETF*ECW 101
           QGGH+  G + F ECW
Sbjct: 44  QGGHKYVGIQFFAECW 59


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.315    0.127    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,125,272
Number of Sequences: 59808
Number of extensions: 32555
Number of successful extensions: 97
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 16,821,457
effective HSP length: 14
effective length of database: 15,984,145
effective search space used: 303698755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)